Pairwise Alignments

Query, 293 a.a., Transcriptional regulator, LysR family from Pseudomonas putida KT2440

Subject, 293 a.a., transcriptional regulator, LysR family (NCBI ptt file) from Shewanella oneidensis MR-1

 Score = 91.3 bits (225), Expect = 2e-23
 Identities = 72/253 (28%), Positives = 117/253 (46%), Gaps = 8/253 (3%)

Query: 1   MHFDLIDLKLFQHTLECGNITAGAGRSHLSLPAASARIRAMEASLGIPLLERNRRGVQPT 60
           M+  +  L+ F   +E  N T  A +  ++ P  S  I+ +E SLG  LL RN + V+ T
Sbjct: 1   MNIPIKTLQCFLTLVETENFTRAAQKCFITQPTLSKIIQRLEESLGETLLIRNNQKVELT 60

Query: 61  PAGQALLQHARLITQQVERLQFDLGQYAQGQQGQVRL-LCNTAALTEYLPELLASYLAEN 119
            AGQ     AR I  Q  RLQ D+   +  + G++RL +C    ++  +  LL SY    
Sbjct: 61  QAGQLFEHSAREILGQWHRLQEDMSNLSGLKSGRLRLGVC--PMMSSLIIGLLTSYRKRY 118

Query: 120 PGVSVDVQELPSLRIVQAITQGMADLGIVSTAAPSEH---LQTRPFRDDPLVLVTPQAHP 176
           PGV + + E       QA+     D  I  TA P+ H   L  +P    PL+   P+AHP
Sbjct: 119 PGVELQMYEYGGFGCEQALLNNSLD--IAFTALPTTHETELINQPLTKYPLLACLPEAHP 176

Query: 177 LASALAPSFVDSLAHGYVGLGAGSALGLYLEEQALHEGQRMQVRVRAEGFDGVIRMVAGG 236
           LA+    S+ D   + ++      +L   +   +   G ++ +  R+  +D +  MV   
Sbjct: 177 LAAKSYLSWQDFEPYPFILYNEDFSLAKLINRLSRKAGVQLNIAFRSGQWDFLATMVEAD 236

Query: 237 AGIGVVPLAAVQR 249
            G+ ++P    Q+
Sbjct: 237 MGLAILPEPICQK 249