Pairwise Alignments

Query, 639 a.a., putative methyl-accepting chemotaxis protein from Pseudomonas putida KT2440

Subject, 572 a.a., methyl-accepting chemotaxis sensory transducer (RefSeq) from Shewanella loihica PV-4

 Score =  259 bits (663), Expect = 2e-73
 Identities = 142/351 (40%), Positives = 229/351 (65%)

Query: 289 LQAIATLLALLVGVLAAVLITRQITRPLQDTLVAVEKIASGDLTQHMRVTRRDELGVLQQ 348
           L AI + +A+L   +++V I R+++  +         IA+GDLT+ +R+   DE   + +
Sbjct: 222 LVAIFSGVAMLAISVSSVFIIRRVSLSVVQLEETAVDIAAGDLTKRIRLGGHDEFAHIAE 281

Query: 349 GIARMGTTLRELISGIRDGVTQIASAAEELSAVTEQTSAGANSQKVETDQVATAMHEMAA 408
            + R+ +  ++ ++      +++ASAAEE + V+ QT      Q+ +T  +ATA+HE  A
Sbjct: 282 HVNRIASDFQQAVTNTHASTSRLASAAEENAVVSTQTQRNVLDQQQQTQLIATAIHEFTA 341

Query: 409 TVQEVARNAEQASHAATGADDEARAGDRVVGEAIGQIERLAEDMHRSTEAMNLLQQESQK 468
           TV+EVA++A  A+ A+  A+  A     VV E+I  IE LA+++ R++EAM LL Q S +
Sbjct: 342 TVREVAQSAASAATASQDANGAAHGAQGVVDESIAVIEALAQELSRASEAMTLLAQHSNE 401

Query: 469 IGSVMDVIKSVAEQTNLLALNAAIEAARAGEAGRGFAVVADEVRGLAQRTQKSTEEIEEL 528
           IG+V+DVI++++EQTNLLALNAAIEAARAGE GRGFAVVADEVR LA+RTQ STEEI+++
Sbjct: 402 IGTVVDVIQAISEQTNLLALNAAIEAARAGEQGRGFAVVADEVRSLAKRTQDSTEEIQKM 461

Query: 529 IASLQHGTQQVANAMQGSRALTDSSVELARKAGSSLESITSTVSSIQSMNQQIAAAAEQQ 588
           I  LQ G +     MQ        SV+ +     +L+ I +++  I ++N QIA A+E+Q
Sbjct: 462 IQRLQQGARDSMQMMQSGTEQVKLSVDKSLMVRDALQQILNSIEEINALNAQIATASEEQ 521

Query: 589 SAVAEEISRSILNVRDVSEQTAAASDETAASSVELARLGGQLQTLVSQFRV 639
           S+V EEI+ +I N+ ++S+QTA  + +++ ++ +LARL   ++  ++ ++V
Sbjct: 522 SSVTEEININITNISEISDQTAEGARQSSDATEDLARLAESMEADIAHYKV 572