Pairwise Alignments

Query, 361 a.a., tRNA/tmRNA (uracil-C(5))-methyltransferase from Pseudomonas putida KT2440

Subject, 415 a.a., RNA methyltransferase from Sinorhizobium meliloti 1021

 Score = 61.2 bits (147), Expect = 5e-14
 Identities = 84/297 (28%), Positives = 131/297 (44%), Gaps = 38/297 (12%)

Query: 67  EKHKAILIDDFPIASERINALMPRLK--AAWQASEELGNRLFQVEFLTTLAGDAMITMCY 124
           + H  + I + PI S  I + +  ++  AA  AS     R+      T L  D  + + +
Sbjct: 142 QSHHIVSIGECPITSPGIVSRLATIRKIAAAMASSAEPFRI------TVLETDTGLDLAF 195

Query: 125 HRPLDEAWEVEARQLAEALGVSVIGRSKGKRLVIGRDYAVEKL----DVAGRVFSYRQPE 180
                E  ++   Q   A+  +V+G     R+ +  +  VE L    D  G   S   P 
Sbjct: 196 -----EGLKLSDPQRRSAVD-AVLGERGIARVSLNGEIVVEPLKPAIDFDGVTVS--PPP 247

Query: 181 GAFTQPNGAVNQKMLSWAFEAIGEREDDLLELYCGNGNFTLPLATRVRQVLATEISKTSV 240
           GAFTQ        M       +G+ +  + +L+ G G F L +A R  +V A E    +V
Sbjct: 248 GAFTQATRPAEDAMAKLVLAHVGKAKR-VADLFAGIGTFALRIA-RTARVHAVEGDDRAV 305

Query: 241 NAALSNLDENAVDNVRLVRLSAEELTQALNEVRPFRR-LEGIDLKSYQFGTVFVDPPRAG 299
            A    LD  A +   L  ++AE+          FRR +   +LK+  F  V  DPPRAG
Sbjct: 306 KA----LDFAARNTQGLKPVTAEKRDL-------FRRPMMAQELKA--FDAVVFDPPRAG 352

Query: 300 MDPDTCELTRR-FERILYISCNPETLAANIAQLQDT-HRIERCALFDQFPYTHHMES 354
            +    EL R   ++I  +SCNP TLA +++ L    +RI      DQF ++ H+E+
Sbjct: 353 AETQCHELARSGVKKIAAVSCNPVTLARDLSILTAAGYRITGVTPIDQFLWSAHVET 409