Pairwise Alignments

Query, 335 a.a., Ubiquinol oxidase subunit II, cyanide insensitive from Pseudomonas putida KT2440

Subject, 330 a.a., cytochrome BD ubiquinol oxidase subunit II from Vibrio cholerae E7946 ATCC 55056

 Score =  224 bits (571), Expect = 2e-63
 Identities = 125/331 (37%), Positives = 187/331 (56%), Gaps = 16/331 (4%)

Query: 5   LPLIWAVIIIFGVMMYVVMDGFDLGIGMLFPFVKGEQDRDVMMNTVAPVWDGNETWLVLG 64
           LP I+ +++ F V MY V+DG+DLG+G+L P     Q RD M+ ++ P WD NETWLVL 
Sbjct: 5   LPEIYLLLLGFTVFMYAVLDGYDLGVGILLPRNDVAQ-RDRMIASIGPFWDANETWLVLA 63

Query: 65  GAGLFGAFPMAYAVVLEALYLPLILMLIGLIFRGVAFEFRFKAKADKRHIWDKAFIWGSL 124
              L  AFP A++++   LYLP  LMLI LI RGVAF+FR KAKAD +  WD  F  GSL
Sbjct: 64  VGILLIAFPTAHSLIFTELYLPTALMLIALIMRGVAFDFRAKAKADHKDHWDLCFKIGSL 123

Query: 125 IATFFQGVALGAFLEGFKVVDRHFAGGTLDWLTPFSLFCGLGLIVAYTLLGCTWLIMKTE 184
           +A   QG  +G ++ GF+     +A         F++   L +  AY  +G  WL++KTE
Sbjct: 124 LAALTQGYMIGRYVVGFESAPEAYA---------FAVLSALCVAAAYVYIGGAWLVLKTE 174

Query: 185 GPLQQKMHDMARPLALVLLVVIGIVSLWTPIAYPQIADRWFSMPNLIWFMPVPLLVLVTF 244
           G LQ +    +R    +  + +  VSL  P     +A+RWFS P +I   PVP++V  T 
Sbjct: 175 GELQVRAARWSRKAGWLAALGVLSVSLVNPWVNSAVAERWFSFPEVILLAPVPIIVFATI 234

Query: 245 YGLLKAVARNAHYT------PFLLTLVLIFLGYSGLGISLWPNIIPPSISIWDAAAPPQS 298
             + + + R           PF   +++  L + GL  S +P I+P  ++   AA+ P++
Sbjct: 235 LVVDRYLKRVPTVNDAGVQWPFFGVVLIFGLSFLGLAYSFFPEIVPGIMTAQQAASSPET 294

Query: 299 QGFMLVGTLFILPFILMYTFWSYYVFRGKVT 329
              + +G + ++P IL+YTF+ Y +F+GK T
Sbjct: 295 LMVVGIGVVIVMPTILLYTFFVYRIFKGKAT 325