Pairwise Alignments

Query, 335 a.a., Ubiquinol oxidase subunit II, cyanide insensitive from Pseudomonas putida KT2440

Subject, 333 a.a., Cytochrome bd ubiquinol oxidase, subunit II (NCBI) from Rhodospirillum rubrum S1H

 Score =  333 bits (854), Expect = 4e-96
 Identities = 171/334 (51%), Positives = 218/334 (65%), Gaps = 3/334 (0%)

Query: 1   MGIDLPLIWAVIIIFGVMMYVVMDGFDLGIGMLFPFVKGEQDRDVMMNTVAPVWDGNETW 60
           M IDLPLIW ++I F V  YVV+DGFDLGIG+LFPF+ GE +R+  MN++APVWDGNETW
Sbjct: 1   MSIDLPLIWGMLIAFAVFAYVVLDGFDLGIGILFPFLGGEDERNRAMNSIAPVWDGNETW 60

Query: 61  LVLGGAGLFGAFPMAYAVVLEALYLPLILMLIGLIFRGVAFEFRFKAKADKRHIWDKAFI 120
           LVLGG GLF AFP AY+V++ A Y P+I ML+ L+FRGVAFEFRF AK  KR  W   F 
Sbjct: 61  LVLGGGGLFAAFPEAYSVLMTAFYAPVIAMLLALVFRGVAFEFRFMAKRGKR-FWTAGFF 119

Query: 121 WGSLIATFFQGVALGAFLEGFKVVDRHFAGGTLDWLTPFSLFCGLGLIVAYTLLGCTWLI 180
            GSL+A   QG+ LGAF++G    D  +AGG  DW +PFSL  G  ++  Y+LLG  WL 
Sbjct: 120 AGSLMAALCQGMMLGAFVQGIAFEDGRYAGGWFDWFSPFSLLTGAAVVCGYSLLGAGWLA 179

Query: 181 MKTEGPLQQKMHDMARPLALVLLVVIGIVSLWTPIAYPQIADRWFSMPNLIWFMPVPLLV 240
           +KT+GPL      +AR   +V LV I  VS  TP+  P  A+RWF  P ++W  P P+ V
Sbjct: 180 IKTDGPLADFAFRIARLAGVVTLVAIVAVSALTPLVAPLAAERWFG-PQMLWHAPAPIAV 238

Query: 241 LVTFYGLLKAVARNAHYTPFLLTLVLIFLGYSGLGISLWPNIIPPSISIWDAAAPPQSQG 300
           +V    LL+A+AR    T FL  L L    Y G  +S +P IIP  ++   AAA   +  
Sbjct: 239 VVLGAVLLRAIARRRELTLFLSGLGLFATCYIGFALSKYPYIIPDHVTFRAAAADEAALA 298

Query: 301 FMLVGTLFILPFILMYTFWSYYVFRGKVTHEDGY 334
           F+L G L ++P IL YT ++Y+VFRGK  HE GY
Sbjct: 299 FLLPGALVLIPIILGYTAYAYWVFRGKTGHE-GY 331