Pairwise Alignments

Query, 139 a.a., Large-conductance mechanosensitive channel from Pseudomonas putida KT2440

Subject, 148 a.a., putative ion channel (NCBI ptt file) from Bacteroides thetaiotaomicron VPI-5482

 Score =  155 bits (391), Expect = 3e-43
 Identities = 81/139 (58%), Positives = 102/139 (73%), Gaps = 11/139 (7%)

Query: 4   LNEFKAFAVKGNVVDMAVGIIIGAAFGKIVSSFVGDVIMPPLGLLIGGVDFSDLAITLKA 63
           L +FKAFA+KGNV+DMAVG++IG AFGKIVSS V +VIMPP+GLL+GGV+F+DL   +KA
Sbjct: 7   LQDFKAFAMKGNVIDMAVGVVIGGAFGKIVSSLVANVIMPPIGLLVGGVNFTDLKWVMKA 66

Query: 64  AEGD------VPAVVLAYGKFIQTVIDFVIVAFAIFMGVKAINKLKREEA-----VAPTT 112
           AE         PAV L YG+F+Q   DF+I+AFAIF+ ++ I KL  ++A      AP  
Sbjct: 67  AEVGADGKEIAPAVSLDYGQFLQATFDFLIIAFAIFLFIRLITKLTTKKAAEEAPAAPPA 126

Query: 113 PPVPSAEETLLTEIRDLLK 131
           PP P+ EE LLTEIRDLLK
Sbjct: 127 PPAPTKEEVLLTEIRDLLK 145