Pairwise Alignments

Query, 456 a.a., DNA repair enzyme from Pseudomonas putida KT2440

Subject, 464 a.a., DNA repair protein RadA from Xanthomonas campestris pv. campestris strain 8004

 Score =  575 bits (1481), Expect = e-168
 Identities = 299/463 (64%), Positives = 359/463 (77%), Gaps = 7/463 (1%)

Query: 1   MAKAKRLYGCTECGATFPKWAGQCGECGAWNTLVETMIES----GGAAAPSSGRAGWTG- 55
           MAKAK  Y C ECGA + KW GQC ECG WNTL E ++ES    G A+  +S R+GW G 
Sbjct: 2   MAKAKTAYVCGECGAEYTKWQGQCTECGVWNTLSEIVLESATPAGKASPAASRRSGWAGK 61

Query: 56  -QQAQIKTLAEVSVEEIPRFTTSSTELDRVLGGGLVDGSVVLIGGDPGIGKSTILLQTLC 114
            +  +I  L +V   E  R +T   E DRVLGGGLV+G+VVLIGGDPGIGKST+LLQ L 
Sbjct: 62  TEAPKITALKDVQQSEQARVSTGIGEFDRVLGGGLVEGAVVLIGGDPGIGKSTLLLQALA 121

Query: 115 NIAVGMPALYVTGEESQQQVAMRSRRLGLPQDQLKVMTETCIETIIATARVEKPRVMVID 174
           ++A  +P LYVTGEES  QVA R+ RL LP + L  + ET IE I+  A V +P+++V D
Sbjct: 122 SMASTLPVLYVTGEESLAQVAGRAVRLDLPLEGLNALAETGIENILQHASVARPKLIVAD 181

Query: 175 SIQTIFTEQLQSAPGGVAQVRESTALLVRYAKQSGTAIFLVGHVTKEGSLAGPRVLEHMV 234
           S+QT++TE L +APG V+QVRES A LVRYAK++GTA+FLVGHVTKEG +AGPRVLEHMV
Sbjct: 182 SVQTLWTESLTAAPGSVSQVRESAARLVRYAKETGTAVFLVGHVTKEGGIAGPRVLEHMV 241

Query: 235 DTVLYFEGESDGRLRLLRAVKNRFGAVNELGVFGMTDRGLKEVSNPSAIFLNRTQEEVPG 294
           D VLYFEGES  R RLLRA KNRFGAVNELGVF M ++GLKEVSNPSAIFL+      PG
Sbjct: 242 DAVLYFEGESGSRFRLLRAFKNRFGAVNELGVFAMGEKGLKEVSNPSAIFLSGGSTHQPG 301

Query: 295 SVVMATWEGTRPMLVEVQALVDDSHLANPRRVTLGLDQNRLAMLLAVLHRHGGIPTHDQD 354
           S VM T EGTRP++VEVQALVD S L+NPRRV +GL+QNRLAMLLAVLHRHGGI   DQD
Sbjct: 302 SCVMVTREGTRPLMVEVQALVDASPLSNPRRVAVGLEQNRLAMLLAVLHRHGGIVVGDQD 361

Query: 355 VFLNVVGGVKVLETASDLALLAAVMSSLRNRPLAHGLLVFGEIGLSGEVRPVPSGQERLK 414
           VF+NVVGG++V ETA+DL +L AV+SSLR+RPLA   + FGE+GLSGE+RPVP+G++RLK
Sbjct: 362 VFVNVVGGIRVQETAADLPVLLAVLSSLRDRPLAEKTIAFGEVGLSGEIRPVPNGEDRLK 421

Query: 415 EAAKHGFKRAIVPKGNAPKEAP-AGLQVIAVTRLEQALDALFE 456
           EAA HGFKRAIVPK NAPK +   G++++AV RL QAL+A  E
Sbjct: 422 EAATHGFKRAIVPKANAPKASSIKGMEIVAVERLSQALEAAAE 464