Pairwise Alignments

Query, 456 a.a., DNA repair enzyme from Pseudomonas putida KT2440

Subject, 478 a.a., DNA repair protein RadA from Synechococcus elongatus PCC 7942

 Score =  387 bits (993), Expect = e-112
 Identities = 215/466 (46%), Positives = 294/466 (63%), Gaps = 17/466 (3%)

Query: 1   MAKAKRLYGCTECGATFPKWAGQCGECGAWNTLVETMIESGGAAA-----PSSGR----A 51
           MA+++  Y C  CG   P++ G+C  C +WN+LVE  I      A     PS  R    A
Sbjct: 1   MARSRSEYVCQNCGHRAPRYVGRCPACESWNSLVEEAIAPTAKTAIATVLPSRQRRDRLA 60

Query: 52  GWTGQQAQIKTLAEVSVEEIPRFTTSSTELDRVLGGGLVDGSVVLIGGDPGIGKSTILLQ 111
               Q    + L+ ++     R  + S E DRVLGGGLV GS+VLIGGDPGIGKST+LLQ
Sbjct: 61  EAPPQAVAAQPLSAIADVSQQRIASGSGEFDRVLGGGLVPGSLVLIGGDPGIGKSTLLLQ 120

Query: 112 TLCNIAVGMPALYVTGEESQQQVAMRSRRLGLPQD------QLKVMTETCIETIIATARV 165
           T   ++   P LYV  EES QQV +R +R+   +       Q  ++ E  ++ I+A    
Sbjct: 121 TATALSQQQPILYVCAEESGQQVKLRWQRIAAHRSPNQADQQFYLLPEIDLDAIVAELET 180

Query: 166 EKPRVMVIDSIQTIFTEQLQSAPGGVAQVRESTALLVRYAKQSGTAIFLVGHVTKEGSLA 225
            +P V +IDSIQ +++  L SAPG VAQVRE TA L+R AKQ    + +VGHVTK+G++A
Sbjct: 181 LRPPVAIIDSIQALYSPALGSAPGSVAQVRECTAALMRVAKQLTITLLIVGHVTKDGAIA 240

Query: 226 GPRVLEHMVDTVLYFEGESDGRLRLLRAVKNRFGAVNELGVFGMTDRGLKEVSNPSAIFL 285
           GP+VLEH+VDTVLYFEG+     RLLR+VKNRFGA  ELG+F M DRGL+EV NPSA+FL
Sbjct: 241 GPKVLEHLVDTVLYFEGDRFASHRLLRSVKNRFGASQELGIFEMVDRGLEEVGNPSALFL 300

Query: 286 NRTQEEVPGSVVMATWEGTRPMLVEVQALVDDSHLANPRRVTLGLDQNRLAMLLAVLHRH 345
               +   G+  +   EGTRP+LVE+QALV  S  ++PRR   G++ NRL  +LAVL + 
Sbjct: 301 GSRDQATSGTATIVACEGTRPLLVELQALVSPSSYSSPRRAGTGIEYNRLLQILAVLEKR 360

Query: 346 GGIPTHDQDVFLNVVGGVKVLETASDLALLAAVMSSLRNRPLAHGLLVFGEIGLSGEVRP 405
            G+P    D ++   GG+ V E A+DL +  A+++S R+R L    ++ GEIGL G+VRP
Sbjct: 361 LGLPLSKFDAYVASAGGLNVAEPAADLGIAIALVASFRDRCLRPDTVLIGEIGLGGQVRP 420

Query: 406 VPSGQERLKEAAKHGFKRAIVPKGNAPKEAPAGLQVIAVTRLEQAL 451
           V   + RLKEAAK GF+RA++PKG   +   + L+++ V+RL  A+
Sbjct: 421 VSQVELRLKEAAKLGFQRALLPKGQ--ERCESDLELVPVSRLVDAI 464