Pairwise Alignments

Query, 456 a.a., DNA repair enzyme from Pseudomonas putida KT2440

Subject, 519 a.a., circadian clock protein KaiC from Synechococcus elongatus PCC 7942

 Score = 48.1 bits (113), Expect = 7e-10
 Identities = 62/237 (26%), Positives = 94/237 (39%), Gaps = 39/237 (16%)

Query: 69  EEIPRFTTSSTELDRVLGGGLVDGSVVLIGGDPGIGKSTILLQTLCN--IAVGMPALYVT 126
           + I +  T     D +  GGL  G   L+ G  G GK+   +Q L N  I    P ++VT
Sbjct: 16  QAIAKMRTMIEGFDDISHGGLPIGRSTLVSGTSGTGKTLFSIQFLYNGIIEFDEPGVFVT 75

Query: 127 GEESQQQVAMRSRRLGLPQDQLKVMTE------------------------TCIETIIAT 162
            EE+ Q +   +R  G   D  K++ E                          IE I   
Sbjct: 76  FEETPQDIIKNARSFG--WDLAKLVDEGKLFILDASPDPEGQEVVGGFDLSALIERINYA 133

Query: 163 ARVEKPRVMVIDSIQTIFTEQLQSAPGGVAQVRESTALLVRYAKQSG-TAIFLVGHVTKE 221
            +  + R + IDS+ ++F +   S     + VR     LV   KQ G T +     + + 
Sbjct: 134 IQKYRARRVSIDSVTSVFQQYDAS-----SVVRRELFRLVARLKQIGATTVMTTERIEEY 188

Query: 222 GSLAGPRVLEHMVDTVLYFEG--ESDGRLRLLRAVKNRFGAVNELG--VFGMTDRGL 274
           G +A   V E + D V+      E + R R L  +K R G  +  G   F +TD G+
Sbjct: 189 GPIARYGVEEFVSDNVVILRNVLEGERRRRTLEILKLR-GTSHMKGEYPFTITDHGI 244