Pairwise Alignments

Query, 456 a.a., DNA repair enzyme from Pseudomonas putida KT2440

Subject, 487 a.a., DNA repair protein RadA from Sinorhizobium meliloti 1021

 Score =  400 bits (1027), Expect = e-116
 Identities = 209/432 (48%), Positives = 286/432 (66%), Gaps = 5/432 (1%)

Query: 1   MAKAKRLYGCTECGATFPKWAGQCGECGAWNTLVETMIESGGAAAPSSGRAGWTGQQAQI 60
           MAKA+  + C  CG    +W G+C  CG WNT++E    +G    P   R    G+   +
Sbjct: 21  MAKARTQFVCQNCGTVHSRWVGKCDGCGEWNTIIEDNPTAGIGGGPM--RTPKKGRPVAL 78

Query: 61  KTLAEVSVEEIPRFTTSSTELDRVLGGGLVDGSVVLIGGDPGIGKSTILLQTLCNIAVGM 120
            TL+   +E+ PR  T  +ELDRV GGG V GS +L+GGDPGIGKST+L+Q    +A   
Sbjct: 79  TTLSG-EIEDAPRIQTGISELDRVTGGGFVRGSALLVGGDPGIGKSTVLMQAAAALARRK 137

Query: 121 P-ALYVTGEESQQQVAMRSRRLGLPQDQLKVMTETCIETIIAT-ARVEKPRVMVIDSIQT 178
              +YV+GEE+  QV +R++RLG     + +  ET +E I+AT +  ++P +++IDSIQT
Sbjct: 138 HRVIYVSGEEAIAQVRLRAQRLGAADSDVLLAAETNVEDILATLSEGKRPDLVIIDSIQT 197

Query: 179 IFTEQLQSAPGGVAQVRESTALLVRYAKQSGTAIFLVGHVTKEGSLAGPRVLEHMVDTVL 238
           ++++ + SAPG V QVR     ++R+AKQ+GTA+ LVGHVTKEG +AGPRV+EHMVD VL
Sbjct: 198 LWSDIVDSAPGTVTQVRTGVQAMIRFAKQTGTAVVLVGHVTKEGQIAGPRVVEHMVDAVL 257

Query: 239 YFEGESDGRLRLLRAVKNRFGAVNELGVFGMTDRGLKEVSNPSAIFLNRTQEEVPGSVVM 298
           YFEG+     R+LR VKNRFG  +E+GVF M+D+GL+EV+NPS +FL     + PG+ V 
Sbjct: 258 YFEGDRGHHYRILRTVKNRFGPTDEIGVFEMSDKGLREVANPSELFLGERNAKSPGAAVF 317

Query: 299 ATWEGTRPMLVEVQALVDDSHLANPRRVTLGLDQNRLAMLLAVLHRHGGIPTHDQDVFLN 358
           A  EGTRP+LVEVQALV  + L  PRR  +G D  RL+M+LAVL  H GI     DV+LN
Sbjct: 318 AGMEGTRPVLVEVQALVAPTSLGTPRRAVVGWDSARLSMILAVLEAHCGIRLGQHDVYLN 377

Query: 359 VVGGVKVLETASDLALLAAVMSSLRNRPLAHGLLVFGEIGLSGEVRPVPSGQERLKEAAK 418
           V GG ++ E A+DLA+ +A++SSL    L    + FGE+ LSG VRPV    +RLKEA K
Sbjct: 378 VAGGYRISEPAADLAVASALVSSLAGLALPPDCVYFGEVSLSGAVRPVAHTAQRLKEAEK 437

Query: 419 HGFKRAIVPKGN 430
            GF +A++P  +
Sbjct: 438 LGFSQAVLPSAS 449