Pairwise Alignments

Query, 688 a.a., putative transporter from Pseudomonas putida KT2440

Subject, 494 a.a., carbon starvation protein A from Vibrio cholerae E7946 ATCC 55056

 Score =  119 bits (297), Expect = 4e-31
 Identities = 134/550 (24%), Positives = 210/550 (38%), Gaps = 120/550 (21%)

Query: 38  LWIVVAAVAIYLVAYRYYSLFIATKVMQLDPRRATPAVLNNDGLDYVPTNKHILFGHHFA 97
           LW +    A+ +  Y  Y  F+  KV  ++ +R TPA    DG+DYVP +   ++     
Sbjct: 2   LWFLTCVAAL-VGGYFIYGAFVE-KVFGINEKRQTPAHTKTDGVDYVPMSTPKVYLVQLL 59

Query: 98  AIAGAGPLVGPVLAAQMGYLPGTLWLIAGVVLAGAVQDFMVLFLSTRRNGRSLGDMVREE 157
            IAG GP+ GP++ A  G     LW++ G + AGAV D+    LS R  G S+  +    
Sbjct: 60  NIAGVGPIFGPIMGALYG-PAAMLWIVVGCIFAGAVHDYFSGMLSIRNGGASVPSITGRY 118

Query: 158 MGRIPGTIALFGCFLIMIIILAVLALIVVKALAESPWGMFTVMATIPIAMFMGIYMRYIR 217
           +G         G    M I   VL L+V      +P GM T +        + +      
Sbjct: 119 LGN--------GAKHFMNIFAIVLLLLVGVVFVSAPAGMITNLINQQTDFTVSM------ 164

Query: 218 PGRIGEISVVGVVLLLASIWLGGVIAADPVWGPAFTFTGVQITWMLVGYGFVAAVLPVWL 277
                      VV++ A   L  ++  D + G  +   G  + +M VG     A      
Sbjct: 165 --------TTMVVIIFAYYILATIVPVDKIIGRFYPLFGALLIFMSVGLMTAIAFSSEHQ 216

Query: 278 VLAPRDYLSTFLKIGTILGLAIGILIIAPELKMPALTQFTDGTGPVWKGTLFPFLFITIA 337
           VL                G  I  ++                  P+W     P LFITIA
Sbjct: 217 VLG---------------GFEISDMV----------KNLNPNDMPLW-----PALFITIA 246

Query: 338 CGAVSGFHALISSGTTPKLLDNETNARYIGYGGMLMESFVAIMAMVAASVIEPGVYFAMN 397
           CGA+SGFHA   S    + ++NE N R++ YG M+ E  +A++    A            
Sbjct: 247 CGAISGFHA-TQSPLMARCMENEKNGRFVFYGAMIGEGIIALIWCTVA------------ 293

Query: 398 SPAAVVGTDVASVAQTVSSWGFLITPEQLEAVARDIGEHTILARAGGAPTLAVGIAQILH 457
                           +S +G       LEA++  +       + GG   +  G +  L 
Sbjct: 294 ----------------LSFFG------SLEALSEAV-------KNGGPGNVVYGASFGLL 324

Query: 458 QVLPGENTMAFWYHFAILFEALFILTAVDAGTRAGRFMLQDLLGSFVPALKRTESWGANL 517
            V  G          A L   +  +T+ D   R+ R +L +        L+       N 
Sbjct: 325 GVFGGV--------IAFLGVVILPITSGDTAFRSSRLILAEYFNMEQKTLR-------NR 369

Query: 518 LATAGCVALWGYLLYQGVIDPLGGINTLWPLFGISNQMLAGIALMLGTVVLIKMKRQRYI 577
           L  A  + + G +L Q  +D       +W  FG +NQ  A   +ML T     M+  +  
Sbjct: 370 LLMAVPLFVIGAVLTQ--VD----FGIIWRYFGFANQATA--VMMLWTATAYLMRHNKLH 421

Query: 578 WVTLLPAVWL 587
           W+  +PA+++
Sbjct: 422 WICTVPALFM 431