Pairwise Alignments

Query, 142 a.a., Sensory box protein from Pseudomonas putida KT2440

Subject, 1301 a.a., Putative diguanylate cyclase/phosphodiesterase (GGDEF & EAL domains) with PAS/PAC sensor(s) and Response Regulator Receiver modulation (NCBI) from Rhodospirillum rubrum S1H

 Score = 47.4 bits (111), Expect = 8e-10
 Identities = 34/116 (29%), Positives = 59/116 (50%), Gaps = 3/116 (2%)

Query: 6   LLQSMVDASNDGIVVAEKEGDDTILIYVNAAFEYLTGYSRDEILYQDCRFLQGDDRDQLG 65
           L  ++   S +GI V + +G    ++ VN AF  +T Y   E+L ++ R LQ   +++  
Sbjct: 751 LASAVFSNSMEGIFVTDLKGS---ILAVNPAFSQITLYEAAEVLGRNARILQSGRQNREF 807

Query: 66  RARIRKAMAEGRPCREVLRNYRKDGSAFWNELSITPVKSDFDQRTYFIGIQKDVSR 121
              + + +      R  + N R+DG  F   LSI+ V++   + T +IGI  D+SR
Sbjct: 808 YVALWQDVLTIGSWRGEIWNRRRDGEVFPEWLSISSVRNHQGEVTNYIGIFSDLSR 863



 Score = 32.0 bits (71), Expect = 3e-05
 Identities = 23/92 (25%), Positives = 43/92 (46%), Gaps = 3/92 (3%)

Query: 40  LTGYSRDEILYQDCRFLQGDDRDQLGRARIRKAMAEGRPCREVL--RNYRKDGSAFWNEL 97
           + GY  DE+L    + +   D D     R  +A+  G+     +  R  RK G + W  L
Sbjct: 659 IVGYPPDELLTLSFQDITHPD-DLRADLRQMEALLAGQIDTYTIEKRYIRKTGESLWINL 717

Query: 98  SITPVKSDFDQRTYFIGIQKDVSRQVELEREL 129
           +++ V+   +   YFI + +++  + E E +L
Sbjct: 718 TVSLVRDIHNAPAYFISVVENIQSRKEAELQL 749