Pairwise Alignments

Query, 142 a.a., Sensory box protein from Pseudomonas putida KT2440

Subject, 1013 a.a., PAS domain S-box from Dechlorosoma suillum PS

 Score = 62.8 bits (151), Expect = 1e-14
 Identities = 33/100 (33%), Positives = 54/100 (54%)

Query: 32  YVNAAFEYLTGYSRDEILYQDCRFLQGDDRDQLGRARIRKAMAEGRPCREVLRNYRKDGS 91
           YVN AF    GYSR+E+L Q+ R LQ     +     + + ++ G   R  L N RKDGS
Sbjct: 494 YVNEAFVRTAGYSREEVLGQNPRILQSGRTPRSSYEEMWRCLSRGEGWRGELFNRRKDGS 553

Query: 92  AFWNELSITPVKSDFDQRTYFIGIQKDVSRQVELERELAE 131
            +  + SI P++      T+++ +++D++ +   E  LAE
Sbjct: 554 EYLEDASINPIRQPDGSITHYLAVKEDITERRATEAALAE 593



 Score = 33.5 bits (75), Expect = 9e-06
 Identities = 32/133 (24%), Positives = 56/133 (42%), Gaps = 8/133 (6%)

Query: 8   QSMVDASNDGIVVAEKEGDDTILIYVNAAFEYLTGYSRDEILYQDCRFLQGDD---RDQL 64
           +++ D   D I V +       ++ VN     + GYSR E+L  D + +  DD     Q 
Sbjct: 599 RTIYDTIGDAIFVHDVASGS--ILDVNGGACRMYGYSRKELLSLDVQGITADDPAFPPQA 656

Query: 65  GRARIRKAMAEGRPCREVLRNYRKDGSAFWNELSITPVKSDFDQRTYFIGIQKDVSRQVE 124
            R  +R+   EG    E +      G  FW  +++   +    QR   + + +D+  +  
Sbjct: 657 ARDYMRRVQEEGPQSFEWMAR-GSSGRQFWVLVNLQIFRLSGGQRV--LAVVRDIDGRKR 713

Query: 125 LERELAELRARPK 137
            E+EL +  A  K
Sbjct: 714 AEQELQQALAEAK 726



 Score = 29.3 bits (64), Expect = 2e-04
 Identities = 27/105 (25%), Positives = 46/105 (43%), Gaps = 7/105 (6%)

Query: 32  YVNAAFEYLTGYSRDEILYQDCRFLQGDDRDQLGRARIRKAMAEGRPCREVL--RNY--- 86
           YV+ + + + G + DE L Q    L   +  Q     + + +A     +E    R+Y   
Sbjct: 365 YVSPSVQAMRGITVDEALQQTMADLLTPECHQHLDGELERWIAAVDTGQEAAASRHYELV 424

Query: 87  --RKDGSAFWNELSITPVKSDFDQRTYFIGIQKDVSRQVELEREL 129
             RKDGS    E  +T +     + T+  GI +D++ +   E EL
Sbjct: 425 QPRKDGSLIQTEAVMTLITDAQGRVTHIQGISRDITERKRAEAEL 469