Pairwise Alignments

Query, 170 a.a., RNA polymerase sigma-70 factor, ECF subfamily from Pseudomonas putida KT2440

Subject, 166 a.a., RNA polymerase subunit sigma from Pseudomonas fluorescens FW300-N2C3

 Score =  155 bits (392), Expect = 3e-43
 Identities = 78/153 (50%), Positives = 105/153 (68%)

Query: 15  VEGLYHAHHNWLTGWLRRRLGCPHSAADLAQDTYMRLLQAREAPQLVEPRAFLATVAKRV 74
           V+ LY  HH WL  WLR RLG    AADLAQDT++RLLQ  E  +L  PRAFL T+A+ +
Sbjct: 8   VQALYSRHHGWLNTWLRTRLGNAADAADLAQDTFVRLLQRSERLELSTPRAFLRTIAQGL 67

Query: 75  LCNHFRRQELERAYLQALAQVPEEVAPCEEQKAIIFETLLALDHLLDGLPPLVKRAFLLA 134
           + +H+RR E+ERAYL+ +A +P    P  E +A+I E L A+  +L+GL P V+RAFLLA
Sbjct: 68  VIDHWRRAEIERAYLETIAHLPPAQTPGAEAQALILELLEAIARMLEGLKPKVRRAFLLA 127

Query: 135 QVDGLGQGEIARELGISLATVKRYLNKAAMRCY 167
           Q +GL   +IA ++GISL +V+RY+  A   CY
Sbjct: 128 QCEGLTYKQIAEQMGISLRSVERYVADALYHCY 160