Pairwise Alignments

Query, 170 a.a., RNA polymerase sigma-70 factor, ECF subfamily from Pseudomonas putida KT2440

Subject, 165 a.a., RNA polymerase sigma factor, sigma-70 family from Dechlorosoma suillum PS

 Score =  160 bits (406), Expect = 8e-45
 Identities = 80/153 (52%), Positives = 105/153 (68%), Gaps = 1/153 (0%)

Query: 18  LYHAHHNWLTGWLRRRLGCPHSAADLAQDTYMRLLQAREAPQLVEPRAFLATVAKRVLCN 77
           LY AHH WL GWLRR+LGC H AADLAQDT++RLL  R A  L EPRA L  +AK ++ +
Sbjct: 12  LYRAHHGWLHGWLRRQLGCSHQAADLAQDTFLRLLGRRSA-DLGEPRALLTHIAKGLVVD 70

Query: 78  HFRRQELERAYLQALAQVPEEVAPCEEQKAIIFETLLALDHLLDGLPPLVKRAFLLAQVD 137
           H+RR+ +E+AYL+ LA++PE  AP  E + ++ E L  +D +L GLPP  +  FLL+Q+D
Sbjct: 71  HWRRRAVEQAYLEVLARLPEAQAPSPETRLLVLEALCRVDAMLAGLPPRTREIFLLSQLD 130

Query: 138 GLGQGEIARELGISLATVKRYLNKAAMRCYFAL 170
           GL  G IA  LG SL TVKR++    + C  AL
Sbjct: 131 GLTYGAIAERLGTSLITVKRHMRNGFIACMAAL 163