Pairwise Alignments

Query, 525 a.a., conserved protein of unknown function containing PepSY-associated TM helix domain from Pseudomonas putida KT2440

Subject, 555 a.a., PepSY-associated TM helix (NCBI) from Rhodospirillum rubrum S1H

 Score =  124 bits (312), Expect = 7e-33
 Identities = 116/486 (23%), Positives = 199/486 (40%), Gaps = 46/486 (9%)

Query: 12  LHTWTGLIFGWLLFAIFLTGTLSYFKEEITHWSQPEVR---SHALDPINSLAVAQRYLQD 68
           +HTWTG++ G  LF  F  G ++ FKE +  W+ P +    + +LD    L ++      
Sbjct: 12  VHTWTGILTGMALFIAFYAGAITVFKEPLARWASPPMTTPVAPSLDDALPLIISTLRASP 71

Query: 69  NAGHSSTWFIRMPNEREAALSVGYRDPSGGPRGFVRKTLDTQ-----TGQPVEAR----- 118
            A    +  +R        L   ++ P+ G       TL  +      G+   AR     
Sbjct: 72  EAAREFSLHLREAEHLPGRLE--WQSPAEGAESHRHDTLGMEHFVAHPGEDGAARIEAVA 129

Query: 119 DSRGGEFFYRFHFQLQMPY--PVGRWLSTFCAFIMLLGLVTGII-THKKIFKEFFTFRPG 175
            S+  EF    H  + +P+     RW+    A +  L LV+G++     + K+ F  RPG
Sbjct: 130 PSKLAEFIDVLHRVVGLPFDSDTARWIMGVIACLYALALVSGVVLLVPTLVKDLFALRPG 189

Query: 176 KG-QRSWLDGHNAIGVLVLPFHLMISYSSLVLFMY--------MVMPAGIMASYGNDTDK 226
           +  +R W D HN +G+  LPFHL+++ ++ V   +         V+  G +AS       
Sbjct: 190 RNLKRLWRDAHNVVGLFSLPFHLVMALTATVFAFHDDLYSLQDTVIHDGRLASVWQAPSP 249

Query: 227 YFNDLFGRNDAPKAAQVATPLVALP--SLYAKVQELQPGARVGNIQVQNPGDSNARV-TF 283
                      P+  +   P   LP   L A+V+ L P      +         A V  +
Sbjct: 250 ---------APPQPGEARDPGALLPPADLLARVRALSPTFTPIRLHYTQATGPRAMVRVW 300

Query: 284 TQSAADHVAYRRSANWTFDGASGALLSQG---KPESGVMMTAFSFAGLHMGNFAGPWLRW 340
            Q A   V+         D  SG +++       +S  + T  SF  LH   + G  ++W
Sbjct: 301 GQDATALVSRPAGGFVAIDPYSGRIVNADYLPGHQSPALTTIGSFFALHFATYGGLPVKW 360

Query: 341 LYFFFGVAGTAVIGTGLVMWLGKRQLKHAKNGHMPGELR----LVEVLNIASMSGLLLAV 396
           +YF  G+AG  +  +G ++W+  R+    +    P   R    ++  L++    G L  +
Sbjct: 361 MYFLLGLAGAWLFYSGNLLWIESRRKTQRRGEATPPRQRRDTTVMAALSVGVCLGCLSGL 420

Query: 397 ASFFWANRLVPMAVEGRADWEVNAFFIAWGLSLVHAVLRSGRKAWGEQLALGALAFALLP 456
           +    A + +   V     W    ++  +  S+  A LR   +A  + L L  LA A +P
Sbjct: 421 SLTIVAGKWLHGVVSDLTTWHQLVYYAVFFASIGWAFLRGAARASVDLLWLATLATAAIP 480

Query: 457 LLNGLT 462
           L +GL+
Sbjct: 481 LTSGLS 486