Pairwise Alignments

Query, 300 a.a., putative permease of the drug/metabolite transporter (DMT) superfamily from Pseudomonas putida KT2440

Subject, 297 a.a., EamA/RhaT family transporter from Vibrio cholerae E7946 ATCC 55056

 Score = 68.9 bits (167), Expect = 1e-16
 Identities = 72/293 (24%), Positives = 117/293 (39%), Gaps = 25/293 (8%)

Query: 1   MNLSLYLLTVLIWGTTWIALKLQLGVVAIPVSIVYRFALAGLILFAFLLITRRLQPMNRR 60
           +NL   L    IWG +++ +++          I  R   A L LF    + RR  P+ + 
Sbjct: 4   VNLLQLLCLAAIWGGSFLFMRIAAHSFGPAYLIEARVGFAALSLFLVAQLLRRSLPIRQH 63

Query: 61  GHQICLAQGLCLFCVNFICFLSASQWIASGLIAVVFSTATLWNALNARIFFGQRIAGNVL 120
                L  GL    V F+ F  A+  +    ++++ STA +W A+   ++ G  ++   +
Sbjct: 64  WPHF-LILGLINTAVPFLLFAYAALTLNVSTLSILNSTAPIWGAVIGFLWHGTPLSRKAV 122

Query: 121 GGGALGLLGLGLLF-WP--ELSHHAASRETLYGLGLALLGTLCFSAGNMLSSMQQKAGLK 177
            G  LG+ G+ ++  W    + HHAA       L  A  G     A N      Q +  +
Sbjct: 123 AGLLLGVSGVAVIVGWDMVAIGHHAALPMVCAALAAASYGL----ATNYTKQAPQLSAFE 178

Query: 178 PMTTNAWGMVYGAVMLAVFCVVSGVPFSMEWNARYIGSLLYLVVPGSVIAFTAYLTLVGR 237
               + W        L  F  +   P S+EW     G+++ L V  + +A+  Y  LV  
Sbjct: 179 NAHGSMWAACLWVAPLMWFVPLRETPSSLEW-----GAVILLGVICTGLAYLIYFRLVKA 233

Query: 238 MGPERAAYCTVLFPLVALNVSAVAEGYQWTAP------ALLGLVAVMAGNVLV 284
           +G       T L P     V  +  GY W          L G + V+AG +LV
Sbjct: 234 IGAASTLSVTFLIP-----VFGILWGY-WILDEPIGLNTLFGTLLVLAGTMLV 280