Pairwise Alignments

Query, 300 a.a., putative permease of the drug/metabolite transporter (DMT) superfamily from Pseudomonas putida KT2440

Subject, 330 a.a., hypothetical protein from Synechococcus elongatus PCC 7942

 Score = 70.5 bits (171), Expect = 5e-17
 Identities = 75/283 (26%), Positives = 125/283 (44%), Gaps = 10/283 (3%)

Query: 1   MNLSLYLLTVLIWGTTWIALKLQLGVVAIPVSIVYRFALAGLILFAFLLITRRLQPMNRR 60
           ++L L + T L WG T+ A ++ +  ++       R+ LA  +L   L       P+NRR
Sbjct: 20  VSLQLAIATAL-WGGTFTAGRIAVQQLSPLAVACGRYLLATTVLLLILWQREGWPPLNRR 78

Query: 61  GHQICLAQGLC-LFCVNFICFLSASQWIASGLIAVVFSTATLWNALNARIFFGQRIAGNV 119
              +    G+  +   N++ F+  S   AS    ++    T   AL A I+ G R+    
Sbjct: 79  QQLLLFGLGVSGIALYNWLFFIGLSLIPASRAALIIALNPTAI-ALGAAIWTGDRLRSWQ 137

Query: 120 LGGGALGLLGLGLLFWPELSHHAASRETLYGLG-LALLG-TLCFSAGNMLSSMQQKAGLK 177
             G  L L+G  LL    L    A   TL G G LAL+G  LC++  ++L+  Q    L 
Sbjct: 138 WAGVGLSLIGAILL----LGSRQAGALTLPGWGDLALVGCVLCWTVYSLLAR-QALRSLS 192

Query: 178 PMTTNAWGMVYGAVMLAVFCVVSGVPFSMEWNARYIGSLLYLVVPGSVIAFTAYLTLVGR 237
           P+T       +G+V+L    +  G    +  +     ++ +L + G+ +AF  Y   + R
Sbjct: 193 PLTVTTGACCWGSVLLIGLWLGQGAQLPVNVSFSTGSAIAFLGLGGTALAFCLYANGIER 252

Query: 238 MGPERAAYCTVLFPLVALNVSAVAEGYQWTAPALLGLVAVMAG 280
           +G  RA     L P+    + A+      +   LLG + V+AG
Sbjct: 253 LGAARAGLFINLVPVFGSAIGALLLQEPLSGLTLLGGLLVLAG 295