Pairwise Alignments

Query, 279 a.a., Transcriptional regulator, AraC family from Pseudomonas putida KT2440

Subject, 249 a.a., Transcriptional regulator, AraC family from Pseudomonas fluorescens FW300-N2E2

 Score =  301 bits (770), Expect = 1e-86
 Identities = 148/246 (60%), Positives = 179/246 (72%), Gaps = 1/246 (0%)

Query: 28  LYQSLDQHRPATLEALLAGVSLLLPMLDAIPNAAIFIKDSAARYALANNTLVQRCGLKRL 87
           +Y SL    P  L+ LL  +  + P+LD + +   FIKD  ARYA  N TL +RCG K  
Sbjct: 1   MYPSLTPFAPCDLDTLLRSLQPIAPLLDTLADVVFFIKDKQARYAFVNQTLARRCGFKHS 60

Query: 88  QPLLGKTSAEVFPAQFGPGYTEQDRRVLKEGLVLEDQLELHLYGSREPGWCLTHKRPLYN 147
             LLG T+ +VFP +FGP YTEQDRRVL  G  L DQLELHLY   +P WCLTHK  L++
Sbjct: 61  GDLLGLTAEQVFPERFGPLYTEQDRRVLASGRELADQLELHLYYGNQPVWCLTHKLALHD 120

Query: 148 PAGEIIGLVGISVDLQSAADSHPAYQRLAAVDEHIRQHFHQPISMSELTRIAGISVAQLE 207
           P G+I+GL GIS DLQ     HPA+ +LAAVD HI+QHF +PIS++ELT IA +SVAQLE
Sbjct: 121 PNGQIVGLAGISRDLQLPQSGHPAFHKLAAVDAHIKQHFARPISLAELTAIAELSVAQLE 180

Query: 208 RYCKRVFHLTPRQMIHKARLEHAHR-LLHSELPITEVAMRCGYTDHSAFSRQFKQLTGFT 266
           R+CKR+F LTPRQMIHKARLE A R LL  +LPITE+A+RCGYTDHSAFSRQF+ LT  +
Sbjct: 181 RHCKRIFQLTPRQMIHKARLEEASRLLLDKDLPITEIALRCGYTDHSAFSRQFRALTSLS 240

Query: 267 PRQYRQ 272
           P QYR+
Sbjct: 241 PSQYRE 246