Pairwise Alignments

Query, 295 a.a., Transcriptional regulator, LysR family from Pseudomonas putida KT2440

Subject, 297 a.a., DNA-binding transcriptional regulator OxyR from Vibrio cholerae E7946 ATCC 55056

 Score = 87.8 bits (216), Expect = 3e-22
 Identities = 67/243 (27%), Positives = 117/243 (48%), Gaps = 4/243 (1%)

Query: 1   MDIKQLKFLIALDQTRHFGQAAALCHITQPTLSMRLRNLEDELDLVLVKRGQRFEGFTEA 60
           M+I+  ++L+AL   +HF +AA  C ++QPTLS ++R LEDE+   L++R  R   FTEA
Sbjct: 1   MNIRDFEYLVALADHKHFRKAAEACFVSQPTLSGQIRKLEDEIGTTLLERSSRRVLFTEA 60

Query: 61  GERILAWARTLLAAHDGLQAEAASCRGQVVGSLRLGTVPLASFNPMHLLLP-LREKYPEL 119
           G +++  A+ +L+     +  A    G + G L +G +P      +  ++P L+E++PEL
Sbjct: 61  GLQLVDQAKKILSEVKTFKDMANQQTGAMTGPLHIGFIPTLGPYLLPKIIPTLKERFPEL 120

Query: 120 HFQLSSLSSEQVIDGLSRNQLDLGICYLDQVNTSFFEVIELGTTTMGLLHDTRHFQFTSD 179
              L    + Q++  L   +LD  +       T+ F+ IEL    + +     H     D
Sbjct: 121 ELYLHEAQTNQLVRQLEEGKLDC-LVLASVEETAPFKEIELYNEVLSIAVPCDHAWAARD 179

Query: 180 RLRWDELGDIPLGLLSKGMHYR-QSLDLSFRSRGLEPNAVLESDSSFQLIQAINTGICCA 238
            +   EL    +  L  G   R Q+L   F + G + +   ++ S   L   +  G    
Sbjct: 180 EVDMLELKGKTVLALGDGHCLRDQALGFCF-AAGAKDDERFKATSLETLRNMVAAGAGIT 238

Query: 239 IMP 241
           ++P
Sbjct: 239 LLP 241