Pairwise Alignments

Query, 299 a.a., conserved membrane protein of unknown function from Pseudomonas putida KT2440

Subject, 327 a.a., hypothetical protein from Synechococcus elongatus PCC 7942

 Score =  119 bits (298), Expect = 9e-32
 Identities = 90/297 (30%), Positives = 140/297 (47%), Gaps = 28/297 (9%)

Query: 1   MIVPPSTDV---LRVLFTLKGSIVKRIALRCLMVTLLAALIVLVERHYPAYFYPV--SAT 55
           M  PP  +    +R    L+GS+V  I  + +  +L   ++  V  +  +   P   S  
Sbjct: 1   MAEPPHNETYSWIRSSLRLRGSVVPIILPQVIYSSLFGVVVAWVHSNILSLDLPALSSLI 60

Query: 56  PFTLLGLSLSIFMSFRNNACYDRWWEGRKAWGKLIIETRSFVRESVVITDETLRT--ELL 113
           P  +LGL L     FR N  Y+R+WEGR+ WG  I +TR+  R   V      R   + L
Sbjct: 61  PNIVLGLLLV----FRTNTAYERFWEGRRIWGNQINQTRNLARLMWVEIPHGDRDAEQQL 116

Query: 114 RNLCGFAHALNARL-----RNEDERAAARPWLARAD----AISPHNVCDGIL---REIGE 161
           R   G+  AL+  +     R   E       ++ AD      SPH V +  L   R + +
Sbjct: 117 RQATGWLVALSIVMKQWLRRQPLEAEELNDLVSPADYQKLLRSPHPVLEVALWIDRYLQQ 176

Query: 162 HCSRLAAQQQISEWRYNLLEQRLAGLTEVQATCERIKGTPLPFPYTLLLHRTIYIFCLLL 221
              R  A  Q++E +     + L GL +    CERI+ TP+P  Y++ L + + I+C  +
Sbjct: 177 QLQRGLAVYQLNEQK-----RLLNGLIDCLGGCERIRNTPMPLAYSVHLKQLMLIYCFTM 231

Query: 222 PFALAEPLGWLAPLFTTIVGYTFFGLDAIGNELEDPFGRDENDLPTDAMVRTVERDV 278
           P  L   LGW  PL   I+ +   G++AIG+E+E+PFG D NDL  +    T+  ++
Sbjct: 232 PLQLVGSLGWRMPLVVGIISFALLGIEAIGHEIENPFGMDANDLRLEQFCNTLRSNL 288