Pairwise Alignments

Query, 377 a.a., Ribonuclease D from Pseudomonas putida KT2440

Subject, 362 a.a., Ribonuclease D (EC 3.1.26.3) from Xanthomonas campestris pv. campestris strain 8004

 Score =  184 bits (467), Expect = 3e-51
 Identities = 123/370 (33%), Positives = 185/370 (50%), Gaps = 14/370 (3%)

Query: 6   HWIRDDQSLAEHCRDWHQLPFVAVDTEFMRVDTFYPKAGLIQIGDGQRAFLIDPLLIGNW 65
           HWI     L E  +   +   + +DTEF+R  T++P+  L+Q+  G+   LIDPL+ G  
Sbjct: 3   HWITHPSELTERLQ--LRPSRIGLDTEFIRERTYWPQLALVQMAIGEEILLIDPLIPGMT 60

Query: 66  QPLADLLEDSAVVKVLHACSEDLEVLLRLTGKLPQPLFDTQLAAGYLNLGFSMGYSRLVQ 125
             L D L    +VKV+H+ SEDL       G LP+PLFDTQ+AA    +G  MGY +LVQ
Sbjct: 61  DALKDWLIAPDIVKVMHSASEDLVTFKCACGVLPRPLFDTQIAAALAGVGGGMGYQKLVQ 120

Query: 126 EVLGIELPKGETRSDWLQRPLSETQVSYAAEDAVHLAELFTVLRPRL-SDDKYAWVLEDG 184
           EV G  L KGETRSDW++RPLS  Q+ YAA+D  +L  +   L  +L + D+  W+ EDG
Sbjct: 121 EVTGTLLTKGETRSDWMRRPLSPAQLEYAADDVRYLFAIHDALTAKLTAQDRLGWLAEDG 180

Query: 185 AELVAALRREVEPESLYRDVKLAWKLAPQQLAVLRELCAWREREARNRDVPRNRILKEHS 244
             L+  +  +      +  ++ A  L P     L  L  WR+ +AR  D PR+ IL    
Sbjct: 181 ERLLGTVEHDDGDRWPHVSLRTAQFLEPAAQRRLLRLLRWRDLQARQSDRPRSWILDNEL 240

Query: 245 LWPMAKSQPNNLSALAKIDEMHPRTIRQDGEFLIQLIKRAASLP-AEQWPAPLPEPLPIE 303
              +A+  P +L AL +  +  P+  R+    L   +  A + P  ++  APL +     
Sbjct: 241 ASQLARFPPADLDALMRQFDKFPKAPRK----LANAVWEALNTPLPDEDHAPLAQASTDG 296

Query: 304 AAGLLKQLRAIGQAEGERLGIAPELMLRKKALEALLKSGYPNGPYQLPDSLRGWRRERMG 363
               LK+L+         L +   ++  ++ LE L++          P +L  WRR+ + 
Sbjct: 297 NKATLKRLQDAVAQRSRELELPDGILASRRHLETLIEQ------RSWPAALGQWRRDALE 350

Query: 364 QALLDNLAGA 373
             LL  L  A
Sbjct: 351 ADLLPLLDAA 360