Pairwise Alignments

Query, 377 a.a., Ribonuclease D from Pseudomonas putida KT2440

Subject, 381 a.a., ribonuclease D from Vibrio cholerae E7946 ATCC 55056

 Score =  227 bits (578), Expect = 5e-64
 Identities = 133/347 (38%), Positives = 202/347 (58%), Gaps = 11/347 (3%)

Query: 27  VAVDTEFMRVDTFYPKAGLIQIGDGQRAFLIDPLLIGNWQPLADLLEDSAVVKVLHACSE 86
           V +DTEF+R  TF+P+ GLIQ+ DG+   LIDP ++    P  +LL+D++V+KVLHAC E
Sbjct: 33  VMLDTEFVRTRTFFPQLGLIQMFDGENLSLIDPTVLDEMTPFVELLQDTSVLKVLHACGE 92

Query: 87  DLEVLLRLTGKLPQPLFDTQLAAGYLNLGFSMGYSRLVQEVLGIELPKGETRSDWLQRPL 146
           DLEV     G  P P+ DTQ+ A +L  G S G++ LVQ+ L +EL K E+R+DWL RPL
Sbjct: 93  DLEVFQNAFGCTPFPMVDTQIMAAFLGYGLSTGFAALVQDQLQVELDKSESRTDWLARPL 152

Query: 147 SETQVSYAAEDAVHLAELFTVLRPRLSDDKYAWVLEDGAELVAALRREV-EPESLYRDVK 205
           S+ Q+ YAA D  +L  ++  L  +++   +       +EL  A R +V  PE  Y D+K
Sbjct: 153 SDKQLEYAAADVFYLLPMYEKLVEQVTQAGWWDAALQESELQVAKRTKVSNPELAYLDIK 212

Query: 206 LAWKLAPQQLAVLRELCAWREREARNRDVPRNRILKEHSLWPMAKSQPNNLSALAKIDEM 265
            AW+L P++LA+L+ L  WR  EA NRD+  N ++KE  L  +++    +   + + + +
Sbjct: 213 GAWQLKPKELAILKPLATWRYHEAVNRDLALNFVIKETDLLTISRLALRSPKRMEE-EGV 271

Query: 266 HPRTIRQDGEFLIQLIKRAASLPAEQWPAPLPEPLPI-EAAG---LLKQLRAIGQAEGER 321
            P  IR+    +I ++K A   PA+ +P   PE +PI E  G   L K+L+   ++    
Sbjct: 272 DPHAIRRHSSKIIAMVKTALETPADAYP---PEIVPIMEYPGYKQLFKRLKDEVKSVSNT 328

Query: 322 LGIAPELMLRKKALEALLKSGY--PNGPYQLPDSLRGWRRERMGQAL 366
            G+A E +  KK L  LL   +     P +LPD ++GWR   +G+ L
Sbjct: 329 SGLATEFLASKKQLNQLLSWVWKRDRDPARLPDLMQGWRLPLLGEKL 375