Pairwise Alignments

Query, 377 a.a., Ribonuclease D from Pseudomonas putida KT2440

Subject, 383 a.a., ribonuclease D protein from Sinorhizobium meliloti 1021

 Score =  193 bits (491), Expect = 6e-54
 Identities = 115/369 (31%), Positives = 200/369 (54%), Gaps = 9/369 (2%)

Query: 8   IRDDQSLAEHCRDWHQLPFVAVDTEFMRVDTFYPKAGLIQIGDGQRAFLIDPLLIG-NWQ 66
           I+    L   CR+  +  ++ +DTEF+R  TF+P   LIQ+   + A ++DP+  G +  
Sbjct: 2   IQTTADLEAACRELARSSYITIDTEFLRETTFWPVLCLIQMASPEMAVIVDPMAPGIDLA 61

Query: 67  PLADLLEDSAVVKVLHACSEDLEVLLRLTGKLPQPLFDTQLAAGYLNLGFSMGYSRLVQE 126
           P   L+ +  VVKV HA  +D+E++  L   +P P+FDTQ+AA     G S+ Y +LV  
Sbjct: 62  PFFALMSNPDVVKVFHAARQDIEIIHHLGNLIPHPIFDTQVAAMVCGFGDSVSYDQLVNR 121

Query: 127 VLGIELPKGETRSDWLQRPLSETQVSYAAEDAVHLAELFTVLRPRLS-DDKYAWVLEDGA 185
           +   ++ K    +DW +RPL++ Q+ YA  D  HL +++  L   L  + + +W+ E+ A
Sbjct: 122 IKNEQIDKSSRFTDWSRRPLTDKQLDYALADVTHLRDIYQYLTKELDREGRSSWLAEEMA 181

Query: 186 ELVAALRREVEPESLYRDVKLAWKLAPQQLAVLRELCAWREREARNRDVPRNRILKEHSL 245
            L +    ++ P++ ++ +K+  K  P +LAVL+++ AWREREAR R+VPR RI+K+ ++
Sbjct: 182 ILESRETYDLHPDNAWQRLKMRVK-KPIELAVLQKVAAWREREARARNVPRGRIIKDDAI 240

Query: 246 WPMAKSQPNNLSALAKIDEMHPRTIRQD-GEFLIQLIKRAASLPAEQWP-APLPEPLPIE 303
           + +A+ QP +  AL ++  +     R   G  LI+ +  A ++P  + P  P     P  
Sbjct: 241 YEIAQQQPKDAEALGRLRTIPKGWERSSAGTALIEAVGEALAIPRGELPRLPRQNHAPEG 300

Query: 304 AAGLLKQLRAIGQAEGERLGIAPELMLRKKALEALLKSGYPNGPYQLPDSLRGWRRERMG 363
           AA   + L+ + +   E+ G+A +++     L+ +   G          +L+GWRRE  G
Sbjct: 301 AAAASELLKVLLKLISEKEGVAAKIIANSDDLDRIAAEGEGAD----VAALKGWRRELFG 356

Query: 364 QALLDNLAG 372
              L  + G
Sbjct: 357 MTALKLING 365