Pairwise Alignments

Query, 377 a.a., Ribonuclease D from Pseudomonas putida KT2440

Subject, 386 a.a., Ribonuclease D (NCBI) from Rhodospirillum rubrum S1H

 Score =  186 bits (471), Expect = 1e-51
 Identities = 120/364 (32%), Positives = 193/364 (53%), Gaps = 10/364 (2%)

Query: 8   IRDDQSLAEHCRDWHQLPFVAVDTEFMRVDTFYPKAGLIQIGDGQRAFLIDPLLIG-NWQ 66
           I   + LA+ C       FV VDTEFMR  T++PK  LIQ+     A  +DPL    +  
Sbjct: 4   ISTTKDLADFCARLSTESFVTVDTEFMREKTYWPKLCLIQLAGTTEAHCVDPLAPDIDMA 63

Query: 67  PLADLLEDSAVVKVLHACSEDLEVLLRLTGKLPQPLFDTQLAAGYLNLGFSMGYSRLVQE 126
           PL  L+ + +V+KV HA  +DLE+ L  +G LP+P+FDTQ+AA     G S+GY  LV +
Sbjct: 64  PLFALMANESVLKVFHAARQDLEIFLHESGHLPKPIFDTQVAAMVCGFGDSVGYETLVAK 123

Query: 127 VLGIELPKGETRSDWLQRPLSETQVSYAAEDAVHLAELFTVLRPRL-SDDKYAWVLEDGA 185
           +    + K    +DW +RPL++ Q+ YAA D  HL  ++  L   L ++ + AW+ ++ A
Sbjct: 124 LAKARIDKSMRFTDWARRPLNDRQLVYAAGDVTHLRVVYERLAETLAANGRTAWLDQEMA 183

Query: 186 ELVAALRREVEPESLYRDVKLAWKLAPQQLAVLRELCAWREREARNRDVPRNRILKEHSL 245
            L       VEPE  +  +K A   + + LA+L+EL AWRER A+ RD+PRNR++++  L
Sbjct: 184 ILTDPAHYRVEPEDAWMRIK-ARSRSARFLALLQELAAWRERTAQERDLPRNRVMRDEGL 242

Query: 246 WPMAKSQPNNLSALAKIDEMHPRTIRQD-GEFLIQLIKRAASLPAEQWPAPLP-EPLPIE 303
             +A S P    AL+++  +         G  +++ ++ A ++P +  P P   E LP  
Sbjct: 243 LEIAASAPTTPDALSQLRSVSKGMAEGTMGLGILEAVRLAQAIPEKALPHPPDREDLPQG 302

Query: 304 AAGLLKQLRAIGQAEGERLGIAPELMLRKKALEALLKSGYPNGPYQLPDSLRGWRRERMG 363
              ++  L+ + + + E  G+A +L+     LE +      +       ++ GWRR   G
Sbjct: 303 LGPVVDLLKVLLKMKCEEAGVAQKLVANMNDLERIAADDNAD-----VLAMEGWRRALFG 357

Query: 364 QALL 367
           +  L
Sbjct: 358 EDAL 361