Pairwise Alignments

Query, 377 a.a., Ribonuclease D from Pseudomonas putida KT2440

Subject, 385 a.a., putative ribonuclease D from Phaeobacter inhibens DSM 17395

 Score =  178 bits (451), Expect = 3e-49
 Identities = 128/363 (35%), Positives = 190/363 (52%), Gaps = 21/363 (5%)

Query: 12  QSLAEHCRDWHQLPFVAVDTEFMRVDTFYPKAGLIQI-----GDGQRAFLIDPLLIG-NW 65
           + L   C    Q  +V VDTEF+R  T+Y K  L+Q+     GD + A L+DPL  G + 
Sbjct: 8   EDLQAFCEAAAQHDYVTVDTEFLRERTYYSKLCLVQLAYPGAGD-ENAVLVDPLADGLSL 66

Query: 66  QPLADLLEDSAVVKVLHACSEDLEVLLRLTGKLPQPLFDTQLAAGYLNLGFSMGYSRLVQ 125
           +PL DL  +  VVKV HA  +DLE+        P+PLFDTQ+AA     G  +GY  LV+
Sbjct: 67  EPLYDLFRNETVVKVFHAARQDLEIFWVDAQVFPKPLFDTQVAAMVCGFGEQVGYETLVR 126

Query: 126 EVLGIELPKGETRSDWLQRPLSETQVSYAAEDAVHLAELFTVLRPRLS-DDKYAWVLEDG 184
           +++   L K    +DW +RPLS+ Q +YA  D  HL +++  L   L    +  WV E+ 
Sbjct: 127 KIVKQGLDKTSRFTDWSRRPLSDAQKTYALADVTHLRQIYEYLAAELKRTGRARWVEEEL 186

Query: 185 AELVAALRREVEPESLYRDVKLAWKLAPQQLAVLRELCAWREREARNRDVPRNRILKEHS 244
             L      +V+P+  +R VK     + + LAV+REL A+RE  A+  +VPRNR+ K+ +
Sbjct: 187 QVLTDPATYDVDPQEAWRRVKTRTN-SGKFLAVVRELAAFRETYAKTNNVPRNRVFKDDA 245

Query: 245 LWPMAKSQPNNLSALAKIDEMHPRTIRQD--GEFLIQLIKRAASLPAEQWPAP--LPEPL 300
           L  +A ++P N S L     +  R  R+    E ++Q + R    PA   P P    E L
Sbjct: 246 LVELASTKPKNASDLGN-SRLLLREARKGAIAEGILQAVARGVDCPAGSQPQPDRSREKL 304

Query: 301 PIEAAGLLKQLRAIGQAEGERLGIAPELMLRKKALEALLKSGYPNGPYQLPDSLRGWRRE 360
            +  A L   LR + +A+ E  G+A +L+     L+A + +G  N P     +L+GWR E
Sbjct: 305 QVNPA-LADLLRVLLKAKTEASGVAAKLIAPSSDLDA-IAAGQRNVP-----ALKGWRLE 357

Query: 361 RMG 363
             G
Sbjct: 358 VFG 360