Pairwise Alignments

Query, 377 a.a., Ribonuclease D from Pseudomonas putida KT2440

Subject, 373 a.a., ribonuclease D from Pantoea sp. MT58

 Score =  218 bits (555), Expect = 2e-61
 Identities = 130/368 (35%), Positives = 197/368 (53%), Gaps = 4/368 (1%)

Query: 8   IRDDQSLAEHCRDWHQLPFVAVDTEFMRVDTFYPKAGLIQIGDGQRAFLIDPLLIGNWQP 67
           I  D  LA+ C+   Q   VA+DTEF+R  T+YP+ GLIQ+ D  +  LIDPL I +W P
Sbjct: 6   IDQDDQLADVCQKARQQAAVALDTEFVRTRTYYPQLGLIQLFDDHQLVLIDPLNIRDWSP 65

Query: 68  LADLLEDSAVVKVLHACSEDLEVLLRLTGKLPQPLFDTQLAAGYLNLGFSMGYSRLVQEV 127
              LL D+ V K LHA  EDLEV L   G LP P+ DTQ+ A +     S G++ +V   
Sbjct: 66  FIALLTDTRVTKFLHAGGEDLEVFLHRFGVLPTPMIDTQILAAFSGQPLSWGFASMVAHF 125

Query: 128 LGIELPKGETRSDWLQRPLSETQVSYAAEDAVHLAELFTVLRPRLSD-DKYAWVLEDGAE 186
             +EL K E+R+DWL RPL++ Q  YAA D  +L  +   L     +    A  L +   
Sbjct: 126 TQVELDKSESRTDWLARPLTQRQCEYAAADVHYLLPIARQLMINTEEAGNMAAALSECDN 185

Query: 187 LVAALRREVEPESLYRDVKLAWKLAPQQLAVLRELCAWREREARNRDVPRNRILKEHSLW 246
           L       + P+  +RD+  AW+L P+QLA L+ L AWR + AR +D+  N +++E  LW
Sbjct: 186 LCQRRLDSLSPDEAWRDITNAWQLRPRQLAALQRLAAWRLKLAREKDMAVNFVVREEHLW 245

Query: 247 PMAKSQPNNLSALAKIDEMHPRTIRQDGEFLIQLIKRAASLPAEQWPAPLPEPLP-IEAA 305
            +A+  P +L  L  +  +    IR  G+ L+ L+  A +L   + PAPL   +   +  
Sbjct: 246 KVARFMPGSLGELDHLG-LSGHEIRFHGKTLVALVAEAEALDESELPAPLGNLIDHPDYK 304

Query: 306 GLLKQLRAIGQAEGERLGIAPELMLRKKALEALLKSGYPNGPY-QLPDSLRGWRRERMGQ 364
            + K ++A+ Q   E+ G + EL+  ++ +  +L   +   P  + P+ L GWR E +  
Sbjct: 305 QVFKAMKALVQQVSEQSGFSQELLASRRQINQVLSQHWGLKPQGRKPELLTGWRGELLKP 364

Query: 365 ALLDNLAG 372
            + + LAG
Sbjct: 365 GIEEILAG 372