Pairwise Alignments

Query, 377 a.a., Ribonuclease D from Pseudomonas putida KT2440

Subject, 261 a.a., exonuclease, putative (NCBI ptt file) from Shewanella oneidensis MR-1

 Score = 55.5 bits (132), Expect = 2e-12
 Identities = 43/131 (32%), Positives = 61/131 (46%), Gaps = 3/131 (2%)

Query: 45  LIQIGDGQRAFLIDPLLIGN-WQPLADLLEDSAVVKVLHACSEDLEVLLRLTGKLPQPLF 103
           L+Q+      +L    ++G+ +  L  LLE+  ++KV      D + L R    L  P  
Sbjct: 101 LVQLATADTCYLFQQAVLGDAFAQLKPLLENEQILKVGIGLRGDGQALKRDWNILVSPRL 160

Query: 104 DTQLAAGYLNLGFSMGYSRLVQEVLG--IELPKGETRSDWLQRPLSETQVSYAAEDAVHL 161
           D   A   L  G  MG  +LV  +L   I+ PK  T S+W Q PLS  Q+ YAA DA+  
Sbjct: 161 DLNWAMAQLGAGKEMGTRQLVAVLLHQRIDKPKKITLSNWQQVPLSPAQIQYAALDALAA 220

Query: 162 AELFTVLRPRL 172
              F  L  +L
Sbjct: 221 NHCFWQLIEKL 231