Pairwise Alignments

Query, 377 a.a., Ribonuclease D from Pseudomonas putida KT2440

Subject, 388 a.a., ribonuclease D (RefSeq) from Shewanella sp. ANA-3

 Score =  207 bits (527), Expect = 4e-58
 Identities = 121/369 (32%), Positives = 206/369 (55%), Gaps = 13/369 (3%)

Query: 7   WIRDDQSLAEHCRDWHQLPFVAVDTEFMRVDTFYPKAGLIQIGDGQRAFLIDPLLIGNWQ 66
           ++ D+ SL      + Q P + +DTEF+R  T+Y K GLIQ  DG+   LIDP+ + +  
Sbjct: 25  YVSDEASLNALVAQYQQSPLLVLDTEFVRTRTYYAKLGLIQAYDGKTLALIDPVALPDLS 84

Query: 67  PLADLLEDSAVVKVLHACSEDLEVLLRLTGKLPQPLFDTQLAAGYLNLGFSMGYSRLVQE 126
               LL++  ++K++H+CSEDLEV      + P PLFD+Q+AA    +G  +GY++LV+ 
Sbjct: 85  AFWSLLDNPNIIKLVHSCSEDLEVFAHYGQRQPTPLFDSQIAASLCGMGHGLGYAKLVET 144

Query: 127 VLGIELPKGETRSDWLQRPLSETQVSYAAEDAVHLAELFTVLRPRL-SDDKYAWVLEDGA 185
            LG  + KGE+R+DW++RPL+E Q+SYAA D ++L +L+  L  +L + D+  W+ E+G 
Sbjct: 145 CLGEVIDKGESRTDWMRRPLTEAQLSYAANDVLYLYQLYPQLADKLKAQDRLGWLYEEGE 204

Query: 186 ELVAALRREVEPESLYRDVKLAWKLAPQQLAVLRELCAWREREARNRDVPRNRILKEHSL 245
            +        + ++ Y  VK A++L   QLA L+ L  WR  +A  RD+    ++K+H L
Sbjct: 205 RMTEGRLATPDMDTAYLRVKNAFQLTEHQLAYLKVLAKWRLEKALARDLALGFVIKDHGL 264

Query: 246 WPMAKSQPNNLSALAKIDEMHPRTIRQDGEFLIQLIKRA-ASLPAEQWPAPLPEPLPIEA 304
             +AK QP ++  L K++++  +  R  G+ ++++++ A  S P E     L + L ++ 
Sbjct: 265 IALAKKQPKSMGDLLKLNDLTEQEKRIHGKDILRVMQTADLSNPPE-----LVDVLALKP 319

Query: 305 A--GLLKQLRAIGQAEGERLGIAPELMLRKKALEALLKSGYPNGPYQLPDSLRGWRRERM 362
                 K ++       E+  I  E++  K+ +   L+  +     +LP  L GWR    
Sbjct: 320 GYKSAFKNIKTCLSELCEQHAIPMEMLGSKRHIHEYLQWRWDKQQGELPTVLSGWR---- 375

Query: 363 GQALLDNLA 371
           GQ   ++LA
Sbjct: 376 GQIAAESLA 384