Pairwise Alignments

Query, 377 a.a., Ribonuclease D from Pseudomonas putida KT2440

Subject, 303 a.a., 3'-5' exonuclease (RefSeq) from Shewanella sp. ANA-3

 Score = 52.8 bits (125), Expect = 1e-11
 Identities = 43/131 (32%), Positives = 59/131 (45%), Gaps = 3/131 (2%)

Query: 45  LIQIGDGQRAFLIDPLLIGN-WQPLADLLEDSAVVKVLHACSEDLEVLLRLTGKLPQPLF 103
           L+Q+      +L    ++G     L  LLE+  ++KV      D + L R       P  
Sbjct: 143 LVQLATSDTCYLFQQAVLGERLAELKPLLENEQILKVGIGLRGDGQALKRDWDIQVSPRL 202

Query: 104 DTQLAAGYLNLGFSMGYSRLVQEVLG--IELPKGETRSDWLQRPLSETQVSYAAEDAVHL 161
           D   A   L  G  MG  +LV  +L   I+ PK  T S+W Q PLS+ QV YAA DA+  
Sbjct: 203 DLNWAMAQLGAGKEMGTRQLVAALLHKRIDKPKKITLSNWQQVPLSQAQVQYAALDALAA 262

Query: 162 AELFTVLRPRL 172
              F  L  +L
Sbjct: 263 TLCFWQLIDKL 273