Pairwise Alignments

Query, 303 a.a., Transcriptional regulator, LysR family from Pseudomonas putida KT2440

Subject, 297 a.a., DNA-binding transcriptional regulator OxyR from Vibrio cholerae E7946 ATCC 55056

 Score =  100 bits (248), Expect = 5e-26
 Identities = 74/278 (26%), Positives = 127/278 (45%), Gaps = 2/278 (0%)

Query: 1   MNLRFLETFVWVARLKSFRLTAEKLFTTQASVSSRIAALEADLGVKLLLRDSRGVSLTPE 60
           MN+R  E  V +A  K FR  AE  F +Q ++S +I  LE ++G  LL R SR V  T  
Sbjct: 1   MNIRDFEYLVALADHKHFRKAAEACFVSQPTLSGQIRKLEDEIGTTLLERSSRRVLFTEA 60

Query: 61  GSKVLEYAERMLETAKAMKQSLDSDR-AKVGRIRIGVMDTVIHTWMSALVAELTERYPQV 119
           G ++++ A+++L   K  K   +    A  G + IG + T+    +  ++  L ER+P++
Sbjct: 61  GLQLVDQAKKILSEVKTFKDMANQQTGAMTGPLHIGFIPTLGPYLLPKIIPTLKERFPEL 120

Query: 120 EIELVADTALNLREQLQKGFLDVILQTDLLREQSIRSLDLARYPMGWVVAAG-AHQHRDY 178
           E+ L       L  QL++G LD ++   +      + ++L    +   V    A   RD 
Sbjct: 121 ELYLHEAQTNQLVRQLEEGKLDCLVLASVEETAPFKEIELYNEVLSIAVPCDHAWAARDE 180

Query: 179 ASLAELGRERIITFSKNSRPHQEVLSLLQAAGAEAPRLNCVNSVAAITRLLRDGFGIGAL 238
             + EL  + ++          + L    AAGA+        S+  +  ++  G GI  L
Sbjct: 181 VDMLELKGKTVLALGDGHCLRDQALGFCFAAGAKDDERFKATSLETLRNMVAAGAGITLL 240

Query: 239 PPALVDAELGRGELVLLEGLQPPPSLELVVAWQTGVAL 276
           P   +  +  +  +  L  + P PS  LV+A++ G  L
Sbjct: 241 PELALPEDKTKDGVCYLRAVNPIPSRRLVLAYRPGSPL 278