Pairwise Alignments

Query, 281 a.a., ATPase, AAA family from Pseudomonas putida KT2440

Subject, 838 a.a., ATP-dependent Clp protease ATP-binding subunit protein from Sinorhizobium meliloti 1021

 Score = 42.7 bits (99), Expect = 3e-08
 Identities = 32/101 (31%), Positives = 48/101 (47%), Gaps = 13/101 (12%)

Query: 33  GEPGTGKTMLAEQLAASFGARLITWHIKSTTKAHQGLYEYDAVSRLRDSQLGVDKVHDVR 92
           G  G GKT +A+QLA S G  L+ + +    + H        VSRL  +  G        
Sbjct: 509 GPTGVGKTEVAKQLATSLGVELLRFDMSEYMERH-------TVSRLIGAPPG------YV 555

Query: 93  NYLKKGKLWEAFEADERVILLIDEIDKADIEFPNDLLQELD 133
            + + G L +  +     +LL+DEI+KA  +  N LLQ +D
Sbjct: 556 GFDQGGLLTDGVDQHPHCVLLLDEIEKAHPDLFNILLQVMD 596



 Score = 25.8 bits (55), Expect = 0.003
 Identities = 13/20 (65%), Positives = 15/20 (75%), Gaps = 1/20 (5%)

Query: 28  PLLVKGEPGTGKTMLAEQLA 47
           PL V G+PG GKT +AE LA
Sbjct: 224 PLYV-GDPGVGKTAIAEGLA 242