Pairwise Alignments

Query, 281 a.a., ATPase, AAA family from Pseudomonas putida KT2440

Subject, 779 a.a., ATP-dependent Clp protease ATP-binding subunit ClpA (NCBI) from Rhodospirillum rubrum S1H

 Score = 43.1 bits (100), Expect = 2e-08
 Identities = 33/104 (31%), Positives = 49/104 (47%), Gaps = 13/104 (12%)

Query: 30  LVKGEPGTGKTMLAEQLAASFGARLITWHIKSTTKAHQGLYEYDAVSRLRDSQLGVDKVH 89
           L  G  G GKT +A QLA   G  L+ + +    + H       +VSRL  +  G     
Sbjct: 499 LFSGPTGVGKTEVARQLARILGIELVRFDMSEYMERH-------SVSRLIGAPPGYV--- 548

Query: 90  DVRNYLKKGKLWEAFEADERVILLIDEIDKADIEFPNDLLQELD 133
               + + G L +A +     +LL+DEI+KA  +  N LLQ +D
Sbjct: 549 ---GFDQGGLLTDAVDQQPHCVLLLDEIEKAHPDLFNILLQVMD 589



 Score = 26.2 bits (56), Expect = 0.002
 Identities = 13/20 (65%), Positives = 15/20 (75%), Gaps = 1/20 (5%)

Query: 28  PLLVKGEPGTGKTMLAEQLA 47
           PLLV G+PG GKT + E LA
Sbjct: 217 PLLV-GDPGVGKTAIVEGLA 235