Pairwise Alignments

Query, 281 a.a., ATPase, AAA family from Pseudomonas putida KT2440

Subject, 773 a.a., ATP-dependent Clp protease ATP-binding subunit from Phaeobacter inhibens DSM 17395

 Score = 45.1 bits (105), Expect = 5e-09
 Identities = 43/148 (29%), Positives = 70/148 (47%), Gaps = 18/148 (12%)

Query: 15  LKLAVNAAITLERPL---LVKGEPGTGKTMLAEQLAASFGARLITWHIKSTTKAHQGLYE 71
           +KLA       E+P+   L  G  G GKT +A+QLA + G  L+ + +    + H     
Sbjct: 484 IKLARAGLREPEKPIGNYLFAGPTGVGKTEVAKQLADTLGVELLRFDMSEYMEKH----- 538

Query: 72  YDAVSRLRDSQLGVDKVHDVRNYLKKGKLWEAFEADERVILLIDEIDKADIEFPNDLLQE 131
             AVSRL  +  G         + + G L +  +     +LL+DEI+KA  +  N LLQ 
Sbjct: 539 --AVSRLIGAPPG------YVGFDQGGLLTDGVDQHPHCVLLLDEIEKAHPDVFNILLQV 590

Query: 132 LDKMEFYVYEIDETIKAKQRPIIIITSN 159
           +D  +   +    T+  +   ++I+TSN
Sbjct: 591 MDNGQLTDHN-GRTVNFR-NVVLIMTSN 616



 Score = 27.7 bits (60), Expect = 8e-04
 Identities = 14/20 (70%), Positives = 16/20 (80%), Gaps = 1/20 (5%)

Query: 28  PLLVKGEPGTGKTMLAEQLA 47
           PLLV G+PG GKT +AE LA
Sbjct: 220 PLLV-GDPGVGKTAIAEGLA 238