Pairwise Alignments

Query, 562 a.a., long-chain-fatty-acid/CoA ligase from Pseudomonas putida KT2440

Subject, 531 a.a., AMP-dependent synthetase and ligase (RefSeq) from Shewanella loihica PV-4

 Score =  502 bits (1292), Expect = e-146
 Identities = 271/549 (49%), Positives = 357/549 (65%), Gaps = 34/549 (6%)

Query: 18  IDINAYASVVEVFERSCKRFADRPAFSNLGVTLSYAELERHSAAFAAWLQQHTDLKPGER 77
           +D+  YAS++++ E + +R+ D+ A+  LG   S+A++ER S  FAA+LQQHT L+ G++
Sbjct: 9   VDLQKYASLIDLIETAAERYGDKTAYVCLGKASSFADIERDSRYFAAYLQQHTQLEVGDK 68

Query: 78  IAVQMPNVLQYPIAVFGAMRAGLIVVNTNPLYTEREMRHQFKDSGARALVYLNMFGKRVQ 137
           +A+Q+PN+ Q+ IA +GA+RAG+I+VNTNPLYT+RE+ HQ++DS A+ALV L+     ++
Sbjct: 69  VAIQLPNITQFVIAAYGALRAGMILVNTNPLYTQRELIHQYRDSDAKALVVLSDLLPTLE 128

Query: 138 EVLPDTGIEYLIEAKMGDLL---PAAKGWLVNTVVDKLKKMVPAYRLPQAVPFKQVLREG 194
            V+P+T IE +I     DL+   P A   L +                  + F QVL  G
Sbjct: 129 TVIPETQIETVISTHPLDLIATQPQADSQLAH------------------IGFNQVLALG 170

Query: 195 RGLSPKPVSLNLDDIAVLQYTGGTTGLAKGAMLTHGNLVANMLQVLACFSQHGPDGQKLL 254
                +PV +    +A LQYTGGTTGL+KGAML+H NL+ANMLQV +  +          
Sbjct: 171 SQAEYRPVEVAQQSLAALQYTGGTTGLSKGAMLSHSNLLANMLQVQSRLASK-------F 223

Query: 255 KDGQEVMIAPLPLYHIYAFTANCMCMMVTGNHNVLITNPRDIPGFIKELGKWRFSALLGL 314
            +G+E+ IAPLP+YHIYAF  N +     G  +VLI NPRDI   I+ + +  F+   GL
Sbjct: 224 VEGEEIFIAPLPIYHIYAFMVNFV-YFEQGGCSVLIPNPRDISALIQTMSQHPFTGFAGL 282

Query: 315 NTLFVALMDHPGFRQLDFSALKVTNSGGTALVKATAERWEDLTGCRIVEGYGLTETSPVA 374
           NTLFV L     F+ LDFS LK+T SGGTAL +A A  W+  TGC I EGYGL+ETSPV 
Sbjct: 283 NTLFVGLCHQQSFQALDFSHLKITISGGTALTQAAASIWQSTTGCTISEGYGLSETSPVV 342

Query: 375 STNPYGQLARLGTVGIPVAGTAFKVIDDDGNELPLGERGELCIKGPQVMKGYWQQPEATA 434
           S N  G L  LGT+G PV  T  K++D    E+P GE GEL +KGPQVM GYWQ+PE TA
Sbjct: 343 SLNAPG-LECLGTIGRPVIDTQVKILDASEQEVPQGEIGELAVKGPQVMSGYWQKPEETA 401

Query: 435 QALDAEGWFKTGDIAVIDPDGFTRIVDRKKDMIIVSGFNVYPNEIEDVVMGHPKVANCAA 494
           + + ++G+FKTGDIA+   DG  +IVDRKKDMIIVSGFNVYPNE+EDV+  H  V  CA 
Sbjct: 402 KVMTSDGFFKTGDIALATEDGMHKIVDRKKDMIIVSGFNVYPNEVEDVLAAHESVLECAV 461

Query: 495 IGVPDERSGEAVKLFVVPREGGLSVDELK----AYCKANFTGYKVPKHIVLRESLPMTPV 550
           IGV D RSGEAVK  +V RE  L+ D  K     +C+A    YK+PK I    +LP + V
Sbjct: 462 IGVDDSRSGEAVKAAIVLREPELANDATKQALLEHCRAQLAAYKLPKIIEFMPALPKSTV 521

Query: 551 GKILRRELR 559
           GKILRRELR
Sbjct: 522 GKILRRELR 530