Pairwise Alignments

Query, 562 a.a., long-chain-fatty-acid/CoA ligase from Pseudomonas putida KT2440

Subject, 549 a.a., AMP-binding protein from Methanococcus maripaludis S2

 Score =  249 bits (635), Expect = 3e-70
 Identities = 165/550 (30%), Positives = 280/550 (50%), Gaps = 30/550 (5%)

Query: 25  SVVEVFERSCKRFADRP--AFSNLGVTLSYAELERHSAAFAAWLQQHTDLKPGERIAVQM 82
           ++ E FE+  ++  DR    + +  +  +Y E +  +   A  L +   +K G+ I +  
Sbjct: 7   TIGEFFEKQAQKDPDREFLVYPDRNLRFTYKEFDERTDLLAKGLLE-IGIKKGDHIGIWA 65

Query: 83  PNVLQYPIAVFGAMRAGLIVVNTNPLYTEREMRHQFKDSGARALVYLNMFGK-RVQEVLP 141
            NV  +   +F   + G+++V  N  Y   E+ +  K S  +AL  ++ F      E+L 
Sbjct: 66  RNVPDWLTFMFATAKIGVVLVTVNTAYKSHELAYVMKQSDMKALAIIDSFRDVNYLEILY 125

Query: 142 DTGIEYLIEAKMGDLLPAAKGWLVNTVVDKLKKMVPAYRLPQAVPFKQVLREGRGLSPKP 201
           +  +  L  ++ G L      +L N +    +K    Y   + +     + + + +  K 
Sbjct: 126 EL-VPELKTSQRGKLNSEEFPYLKNVIYVGQEKHRGMYNTTELMLLGNYVSDEKLIEAKK 184

Query: 202 VSLNLDDIAVLQYTGGTTGLAKGAMLTHGNLVANMLQVLACFSQHGPDGQKLLKDGQEVM 261
             L+ DD+  +QYT GTTG  KG MLTH N++ N   +          G+K     +E +
Sbjct: 185 -GLDSDDVINMQYTSGTTGFPKGVMLTHKNILNNGYYI----------GEKQKFTEEERL 233

Query: 262 IAPLPLYHIYAFTANCMCMMVTGNHNVL--ITNPRDIPGFIKELGKWRFSALLGLNTLFV 319
             P+PL+H +      + ++  G   V+  I +P  +   I+   K + +A+ G+ T+F+
Sbjct: 234 CLPVPLFHCFGIVLGVLALLTHGGTLVMLEIFDPLLVLAAIQ---KEKCTAVYGVPTMFI 290

Query: 320 ALMDHPGFRQLDFSALKV-TNSGGTALVKATAERWEDLTGCRIVEGYGLTETSPVAST-- 376
           A   HP F   D S+L+    +G T  ++A  +   D+    I   YGLTE SPV +   
Sbjct: 291 AEFSHPMFEMFDLSSLRTGIMAGSTCPIEAMKKVMSDMYMREITISYGLTEASPVFTMTS 350

Query: 377 --NPYGQLARLGTVGIPVAGTAFKVIDDD-GNELPLGERGELCIKGPQVMKGYWQQPEAT 433
             +P+ +  R+ +VG  +     K+ID + G  L  G  GE+C +G  VMKGY++ PE T
Sbjct: 351 VDDPFEK--RVESVGKAMPHCEVKIIDPETGETLAPGNVGEICCRGYNVMKGYYKMPEKT 408

Query: 434 AQALDAEGWFKTGDIAVIDPDGFTRIVDRKKDMIIVSGFNVYPNEIEDVVMGHPKVANCA 493
           A+ ++ +GW  +GD+AV D DG+ +IV R KDMII  G N+YP EIE+ +   P + +  
Sbjct: 409 AEVIEKDGWLHSGDLAVEDEDGYYKIVGRIKDMIIRGGENIYPREIEEFLYTMPGINDAQ 468

Query: 494 AIGVPDERSGEAVKLFVVPREG-GLSVDELKAYCKANFTGYKVPKHIVLRESLPMTPVGK 552
            +G+PDE+ GE V  FV+P+EG  +  ++++ +       YKVPKH+ + E  PMT  GK
Sbjct: 469 VVGIPDEKYGEIVGAFVIPKEGYEIKEEDVRDFALEKIARYKVPKHVFVVEEFPMTASGK 528

Query: 553 ILRRELRDIA 562
           I + +L ++A
Sbjct: 529 IQKFKLTELA 538