Pairwise Alignments

Query, 565 a.a., long-chain-fatty-acid/CoA ligase from Pseudomonas putida KT2440

Subject, 566 a.a., long-chain-fatty-acid--CoA ligase FadD from Vibrio cholerae E7946 ATCC 55056

 Score =  605 bits (1559), Expect = e-177
 Identities = 292/550 (53%), Positives = 399/550 (72%), Gaps = 2/550 (0%)

Query: 6   WKDKYPAGITAEINPDEFPNIQAVLKQSCQRFADKPAFSNLGKTITYGELYALSGAFAAW 65
           W  +YP  +   INPD++P++  + +QS  ++AD+PAF N+G  +T+ +L   S AFAA+
Sbjct: 5   WLSRYPKDVPETINPDQYPSLVEMFEQSVHKYADQPAFMNMGAVMTFRKLEERSRAFAAY 64

Query: 66  LQQHTDLKPGDRIAVQLPNVLQYPVAVFGAMRAGLIVVNTNPLYTAREMEHQFNDSGAKA 125
           LQ    LK GDR+A+ +PN+LQYPVA+FG +RAG+I VN NPLYT RE+EHQ ND+ A+A
Sbjct: 65  LQNDLKLKKGDRVALMMPNLLQYPVALFGVLRAGMIAVNVNPLYTPRELEHQLNDADARA 124

Query: 126 LVCLANMAHLAEKVVPKTQVRHVIVTEVADLLPPLKRLLINSVIKYVKKMVPAYNLPQAV 185
           +V ++N A+  E++V  TQV+HV++T +  +LP  K  +++ V+KYVK MVP Y+LP A+
Sbjct: 125 IVIVSNFANTLEQIVANTQVKHVVLTSLGQMLPRAKGTIVDFVVKYVKGMVPKYDLPGAI 184

Query: 186 RFNDALALGKGQPVTEANPQANDVAVLQYTGGTTGVAKGAMLTHRNLVANMLQCRALMGS 245
               AL  G+     +      D+A LQYTGGTTGVAKGA+LTHRN+VAN+LQ +   G 
Sbjct: 185 SMRKALHKGRRLQYVKPFMSGEDIAFLQYTGGTTGVAKGAILTHRNMVANVLQAKGAYGP 244

Query: 246 NLHEGCEILITPLPLYHIYAFTFHCMAMMLIGNHNVLISNPRDLPAMVKELGKWKFSGFV 305
            L EG E+++T LPLYH++A T +C+  + +G  N+LI+NPRD+P  VKEL K+ F+   
Sbjct: 245 VLQEGRELVVTALPLYHVFALTVNCLLFIEMGGRNLLITNPRDIPGFVKELQKYPFTAIT 304

Query: 306 GLNTLFVALCNNEAFRALDFSALKITLSGGMALQLSVAERWKAVTGCAICEGYGMTETSP 365
           G+NTLF AL NNE F  LDF  +K+ + GGMA+Q +VAERWK  TG  + EGYG+TE SP
Sbjct: 305 GVNTLFNALVNNEDFHELDFKNMKLAVGGGMAVQRAVAERWKKTTGVHLLEGYGLTECSP 364

Query: 366 VAAVNPSE-ANQVGTIGIPVPSTLCKVIDDAGNELPLGEVGELCVKGPQVMKGYWQREDA 424
           +   NP +  +  G IG+PVPST  +++DDAGN +P  +VGEL V+GPQVM+GYWQR +A
Sbjct: 365 LVTGNPYDLTDYTGAIGLPVPSTEVRIVDDAGNVVPNDQVGELQVRGPQVMQGYWQRPEA 424

Query: 425 TAEILDSEGWLKTGDIAVIQADGYMRIVDRKKDMILVSGFNVYPNELEDVLAALPGVLQC 484
           T E+L++EGWL TGDI      G + IVDRKKDMILVSGFNVYPNE+EDV+A    VL+ 
Sbjct: 425 TKEVLNAEGWLSTGDIVKFDDQGLIHIVDRKKDMILVSGFNVYPNEIEDVVALHGKVLEV 484

Query: 485 AAIGVPDEKSGEVIKVFIVVKPGMTVTKEQVMEHMRANVTGYKVPRHIEFRDSLPTTNVG 544
           AAIG  ++ SGE++K++ VVK   ++TK++V+ H R ++TGYKVP+ +EFRD LP TNVG
Sbjct: 485 AAIGQANDVSGELVKIY-VVKRDPSLTKDEVIAHCRKHLTGYKVPKLVEFRDDLPKTNVG 543

Query: 545 KILRRELRDE 554
           KILRR LR+E
Sbjct: 544 KILRRVLREE 553