Pairwise Alignments

Query, 565 a.a., long-chain-fatty-acid/CoA ligase from Pseudomonas putida KT2440

Subject, 531 a.a., AMP-dependent synthetase and ligase (RefSeq) from Shewanella loihica PV-4

 Score =  508 bits (1309), Expect = e-148
 Identities = 262/540 (48%), Positives = 366/540 (67%), Gaps = 19/540 (3%)

Query: 16  AEINPDEFPNIQAVLKQSCQRFADKPAFSNLGKTITYGELYALSGAFAAWLQQHTDLKPG 75
           A ++  ++ ++  +++ + +R+ DK A+  LGK  ++ ++   S  FAA+LQQHT L+ G
Sbjct: 7   AHVDLQKYASLIDLIETAAERYGDKTAYVCLGKASSFADIERDSRYFAAYLQQHTQLEVG 66

Query: 76  DRIAVQLPNVLQYPVAVFGAMRAGLIVVNTNPLYTAREMEHQFNDSGAKALVCLANMAHL 135
           D++A+QLPN+ Q+ +A +GA+RAG+I+VNTNPLYT RE+ HQ+ DS AKALV L+++   
Sbjct: 67  DKVAIQLPNITQFVIAAYGALRAGMILVNTNPLYTQRELIHQYRDSDAKALVVLSDLLPT 126

Query: 136 AEKVVPKTQVRHVIVTEVADLLPPLKRLLINSVIKYVKKMVPAYNLPQAVRFNDALALGK 195
            E V+P+TQ+  VI T   DL+    +   +S + ++              FN  LALG 
Sbjct: 127 LETVIPETQIETVISTHPLDLIATQPQA--DSQLAHIG-------------FNQVLALGS 171

Query: 196 GQPVTEANPQANDVAVLQYTGGTTGVAKGAMLTHRNLVANMLQCRALMGSNLHEGCEILI 255
                        +A LQYTGGTTG++KGAML+H NL+ANMLQ ++ + S   EG EI I
Sbjct: 172 QAEYRPVEVAQQSLAALQYTGGTTGLSKGAMLSHSNLLANMLQVQSRLASKFVEGEEIFI 231

Query: 256 TPLPLYHIYAFTFHCMAMMLIGNHNVLISNPRDLPAMVKELGKWKFSGFVGLNTLFVALC 315
            PLP+YHIYAF  + +     G  +VLI NPRD+ A+++ + +  F+GF GLNTLFV LC
Sbjct: 232 APLPIYHIYAFMVNFVYFEQ-GGCSVLIPNPRDISALIQTMSQHPFTGFAGLNTLFVGLC 290

Query: 316 NNEAFRALDFSALKITLSGGMALQLSVAERWKAVTGCAICEGYGMTETSPVAAVNPSEAN 375
           + ++F+ALDFS LKIT+SGG AL  + A  W++ TGC I EGYG++ETSPV ++N     
Sbjct: 291 HQQSFQALDFSHLKITISGGTALTQAAASIWQSTTGCTISEGYGLSETSPVVSLNAPGLE 350

Query: 376 QVGTIGIPVPSTLCKVIDDAGNELPLGEVGELCVKGPQVMKGYWQREDATAEILDSEGWL 435
            +GTIG PV  T  K++D +  E+P GE+GEL VKGPQVM GYWQ+ + TA+++ S+G+ 
Sbjct: 351 CLGTIGRPVIDTQVKILDASEQEVPQGEIGELAVKGPQVMSGYWQKPEETAKVMTSDGFF 410

Query: 436 KTGDIAVIQADGYMRIVDRKKDMILVSGFNVYPNELEDVLAALPGVLQCAAIGVPDEKSG 495
           KTGDIA+   DG  +IVDRKKDMI+VSGFNVYPNE+EDVLAA   VL+CA IGV D +SG
Sbjct: 411 KTGDIALATEDGMHKIVDRKKDMIIVSGFNVYPNEVEDVLAAHESVLECAVIGVDDSRSG 470

Query: 496 EVIKVFIVVKP---GMTVTKEQVMEHMRANVTGYKVPRHIEFRDSLPTTNVGKILRRELR 552
           E +K  IV++        TK+ ++EH RA +  YK+P+ IEF  +LP + VGKILRRELR
Sbjct: 471 EAVKAAIVLREPELANDATKQALLEHCRAQLAAYKLPKIIEFMPALPKSTVGKILRRELR 530