Pairwise Alignments

Query, 565 a.a., long-chain-fatty-acid/CoA ligase from Pseudomonas putida KT2440

Subject, 557 a.a., long-chain-fatty-acid--CoA ligase (RefSeq) from Shewanella loihica PV-4

 Score =  582 bits (1499), Expect = e-170
 Identities = 286/554 (51%), Positives = 399/554 (72%), Gaps = 2/554 (0%)

Query: 2   IENFWKDKYPAGITAEINPDEFPNIQAVLKQSCQRFADKPAFSNLGKTITYGELYALSGA 61
           +E  W    P  + A I+  ++ ++  + + S  ++AD+PAF N+G T+TY +L   S A
Sbjct: 1   MEQLWTKNLPHDVPAIIDAKQYSSLIDLFESSVAKYADQPAFVNMGATLTYRKLEERSRA 60

Query: 62  FAAWLQQHTDLKPGDRIAVQLPNVLQYPVAVFGAMRAGLIVVNTNPLYTAREMEHQFNDS 121
           FAA+LQ    L+ GDR+A+ +PN+LQYP+A+FG +RAG++VVN NPLYT RE++HQ NDS
Sbjct: 61  FAAYLQNELKLQKGDRVAIMMPNLLQYPIALFGILRAGMVVVNVNPLYTPRELKHQLNDS 120

Query: 122 GAKALVCLANMAHLAEKVVPKTQVRHVIVTEVADLLPPLKRLLINSVIKYVKKMVPAYNL 181
           GAKA+V ++N A+  E+VV +T V+ VI+T + DLL   KR L+N V+KY+KKMVP Y+L
Sbjct: 121 GAKAIVVVSNFANTLEQVVEQTPVKSVILTGLGDLLSAPKRTLVNFVVKYIKKMVPKYHL 180

Query: 182 PQAVRFNDALALGKGQPVTEANPQANDVAVLQYTGGTTGVAKGAMLTHRNLVANMLQCRA 241
           P A+    +L+ G+     +   + +D+A LQYTGGTTGV+KGAMLTH N+V+N+LQ  A
Sbjct: 181 PHAISMRQSLSKGRRLQYVKPTIKGDDIAFLQYTGGTTGVSKGAMLTHGNIVSNLLQADA 240

Query: 242 LMGSNLHEGCEILITPLPLYHIYAFTFHCMAMMLIGNHNVLISNPRDLPAMVKELGKWKF 301
                L +G E ++T LPLYHI+A T +C+  +  G +N+LI+NPRD+PA V EL K  F
Sbjct: 241 AYSPLLADGKEFVVTALPLYHIFALTVNCLLFLHKGANNLLITNPRDIPAFVSELKKHPF 300

Query: 302 SGFVGLNTLFVALCNNEAFRALDFSALKITLSGGMALQLSVAERWKAVTGCAICEGYGMT 361
           +   G+NTLF AL ++E F+ LDFS LK+++ GGMA+Q +VA++W+ +T   + EGYG+T
Sbjct: 301 TALTGVNTLFNALVSSEEFKTLDFSNLKLSIGGGMAVQRAVADKWQGITKTRLLEGYGLT 360

Query: 362 ETSPVAAVNPSEANQV-GTIGIPVPSTLCKVIDDAGNELPLGEVGELCVKGPQVMKGYWQ 420
           E SP+    P       G+IG PV +T  +V D+ GN LP GE GEL  KGPQVMKGYWQ
Sbjct: 361 EASPLLTCCPYNLEGYNGSIGFPVANTDMQVRDEEGNVLPQGETGELFAKGPQVMKGYWQ 420

Query: 421 REDATAEILDSEGWLKTGDIAVIQADGYMRIVDRKKDMILVSGFNVYPNELEDVLAALPG 480
           R + TA+++D +G+L TGDI  +   G+  IVDRKKDMILVSGFNV+PNE+E+V+A  P 
Sbjct: 421 RPEETAKVIDKDGYLATGDIGYMDEQGFFFIVDRKKDMILVSGFNVFPNEVEEVVALHPK 480

Query: 481 VLQCAAIGVPDEKSGEVIKVFIVVKPGMTVTKEQVMEHMRANVTGYKVPRHIEFRDSLPT 540
           VL+ AA+GVP E SGE++KVF+V K   ++T+EQV++H R ++TGYK+P+ +EFRD LP 
Sbjct: 481 VLEVAAVGVPHEVSGELVKVFVVPK-DKSLTEEQVIKHCRHHLTGYKIPKLVEFRDELPK 539

Query: 541 TNVGKILRRELRDE 554
           +NVGKILRRELRDE
Sbjct: 540 SNVGKILRRELRDE 553