Pairwise Alignments

Query, 1301 a.a., ATP-dependent helicase HrpA from Pseudomonas putida KT2440

Subject, 1360 a.a., ATP-dependent helicase HrpA from Pseudomonas stutzeri RCH2

 Score = 2065 bits (5351), Expect = 0.0
 Identities = 1041/1359 (76%), Positives = 1166/1359 (85%), Gaps = 59/1359 (4%)

Query: 1    MTDH--AIDKLLQNLDHAMIADRHCLRRQLHELRKRPDEAKLAQWVEKVQASCAQVTARQ 58
            MTD   AID LL+NLD A+ ADRH LRRQLHELRK+PDEAKLAQW+E+ QAS A+V AR+
Sbjct: 1    MTDATPAIDTLLKNLDQALFADRHRLRRQLHELRKQPDEAKLAQWLERFQASVAKVEARR 60

Query: 59   QSVPTVRYDDNLPIAAKRDEIKKALAENQVLVIAGETGSGKTTQLPKICLELGRGSHGLI 118
            +SVP++RYDD+LPIAAKRDEIK AL ++QVLVIAGETGSGKTTQLPKICLE+GRG HGLI
Sbjct: 61   RSVPSIRYDDSLPIAAKRDEIKAALEKHQVLVIAGETGSGKTTQLPKICLEIGRGVHGLI 120

Query: 119  AHTQPRRIAARSVAARVAEELGTPLGALVGYQVRFEDQSDSNTLVKLMTDGILLAETQHD 178
             HTQPRR+AARSVA RVAEE+GTPLG LVGYQVRFEDQS  ++L+KLMTDGILLAETQHD
Sbjct: 121  GHTQPRRLAARSVATRVAEEIGTPLGELVGYQVRFEDQSKDSSLIKLMTDGILLAETQHD 180

Query: 179  RFLERYDTIIVDEAHERSLNIDFLLGYLKTLLHRRPDLKLIITSATIDLERFSRHFDGAP 238
            RFLERYDTIIVDEAHERSLNIDFLLG+LKTLL RRPDLK+IITSATIDL+RFS HFDGAP
Sbjct: 181  RFLERYDTIIVDEAHERSLNIDFLLGFLKTLLPRRPDLKVIITSATIDLQRFSEHFDGAP 240

Query: 239  IIEVSGRTFPVDTWYRPLTSEQDEEGNQIEDDLTVDQAILATLDELAQHERSEGKGPGDV 298
            I+EVSGRT+PV+TWYRPL +E DE+GN++EDDLTVDQ ILA LDE+  HE+S GK PGDV
Sbjct: 241  IVEVSGRTYPVETWYRPLAAEIDEDGNRVEDDLTVDQGILAALDEITAHEQSVGKRPGDV 300

Query: 299  LIFLPGEREIRDAAEILRKAQLRHTEILPLYARLSPAEQQRIFQPHTGRRVVLATNVAET 358
            L+FLPGEREIRDAAE+LRKA L+ TE+LPLYARL+PAEQQ+IFQP  GR++VLATNVAET
Sbjct: 301  LVFLPGEREIRDAAEVLRKANLKFTEVLPLYARLTPAEQQKIFQPRPGRKIVLATNVAET 360

Query: 359  SLTVPGIRYVIDTGTARISRYSYRAKVQRLPIEAVSQASANQRKGRCGRVEPGICVRLYS 418
            SLTVPGIRYVID+GTARISRYSYRAKVQRLPIEAVSQASANQRKGRCGRVEPGIC+RLYS
Sbjct: 361  SLTVPGIRYVIDSGTARISRYSYRAKVQRLPIEAVSQASANQRKGRCGRVEPGICIRLYS 420

Query: 419  EEDFNSRPAFTDPEILRTNLAAVILQMLHLRLGAIDAFPFIEPPDGKAISDGFNLLQELS 478
            EEDF  RP FTDPEILRTNLAAVILQMLHLRLG I  FPFIEPPDGKAISDGFNLLQELS
Sbjct: 421  EEDFLGRPEFTDPEILRTNLAAVILQMLHLRLGDIQDFPFIEPPDGKAISDGFNLLQELS 480

Query: 479  AVNRENQLTPIGRQLARLPIDPRLGRMLLEGARLGSLQEVLIVTSALSVQDPRERPPERQ 538
            AVNRENQLTP+GRQLARLPIDPRLGRMLLE A+ GSL EVLIV SALSVQD RERP +RQ
Sbjct: 481  AVNRENQLTPMGRQLARLPIDPRLGRMLLEAAQQGSLAEVLIVASALSVQDVRERPADRQ 540

Query: 539  QAADQAHAQWKDVDSDFAALVNLWRGFEEQRQALTANPLRNWCRKQFLNYLRLREWRD-- 596
            QAADQAHAQWKD DSDFAAL+NLWRGFEE+RQ L +NPLR WCRK FLNYLRLREWRD  
Sbjct: 541  QAADQAHAQWKDPDSDFAALINLWRGFEEKRQELGSNPLRTWCRKNFLNYLRLREWRDAH 600

Query: 597  ------------------------AHRQLALICRD------LQLTVNKEPT--------- 617
                                    AH   A    D      L   V+ +P          
Sbjct: 601  RQLTLIARELKLGSGRSADGSGQAAHADKARRVEDGEASSALSAGVSTQPAPTKDTKVNV 660

Query: 618  ----------------DYQKLHKAILSGLLSQIGQKTEEGDYQGARQRRFWVHPSSGLGR 661
                             Y  +HKAIL+GLLSQIG KTEEGD+ GARQRRFWVHPSS +GR
Sbjct: 661  ILRQQAEASEAAQKAKSYASVHKAILAGLLSQIGNKTEEGDFLGARQRRFWVHPSSVIGR 720

Query: 662  KRPQWVMAAELVETTKLYARMVAKIEPDWIEPLAGHLIKKNHFEPHWEKKRGQVVAYEQI 721
            K+P W+MAAELVETTKL+ARMVAKIEPDWIEPLAGHLIKKNHFEPHWEKKRGQVVAYEQ+
Sbjct: 721  KKPNWLMAAELVETTKLFARMVAKIEPDWIEPLAGHLIKKNHFEPHWEKKRGQVVAYEQV 780

Query: 722  TLYGLILVGRRPVHYGPIDPATSRELFIREGLVGGEIQSRAKCLAANKRLLGELDELEAK 781
            TLYG+I+VGRRPVHYGPIDP  +RELFIREGLV GEI SRA+ L+AN+ LL  LDELEAK
Sbjct: 781  TLYGMIVVGRRPVHYGPIDPPAARELFIREGLVRGEINSRARALSANRELLERLDELEAK 840

Query: 782  ARRRDILADEETLYAFYEARLPAEIHQTATFDSWYRMGSQKDANLLIMREEDVLAREASE 841
            ARRRDILADEETL+ +Y+ARLPA+I+QTA+F++WY+  S K+  LLIMREEDVLAREASE
Sbjct: 841  ARRRDILADEETLFDYYDARLPADIYQTASFENWYKRESAKNPQLLIMREEDVLAREASE 900

Query: 842  VTAAQYPDSMQVGDLRLPLSYHFEPGHPRDGVTVRVPAPLLPSLPGERLEWLVPGLLEAK 901
            VTAAQYPD +++G+L+LPL YHFEP HPRDGVT+RVPAPLLP L  ERL+WLVPGLLE K
Sbjct: 901  VTAAQYPDYLRIGELQLPLEYHFEPNHPRDGVTLRVPAPLLPQLRSERLDWLVPGLLETK 960

Query: 902  CVALVRNLPKALRKNFVPVPDFVKASLARMTFGQGALPQALGQELLRMTGARVSDEAWDE 961
             VALVRNLPKALRKNFVPVPDFV A+LAR+ FG+G+LP+ALG+ELLRMTGARVSD+AW E
Sbjct: 961  AVALVRNLPKALRKNFVPVPDFVGAALARIAFGEGSLPEALGRELLRMTGARVSDDAWAE 1020

Query: 962  SVNQVEGHLRMNIEVVDGQGKFLGEGRDLAELTARFAAASQAALAVPRDAKGEQPVQAKA 1021
            +   +E HL+MNIEVVD +GKFLGEGRDLAELTARFA ASQAALA P+    ++PV+AK 
Sbjct: 1021 AAAGLESHLKMNIEVVDARGKFLGEGRDLAELTARFAEASQAALAPPQQKAEQKPVEAKG 1080

Query: 1022 FSEVKQTAQQKIAGLSMTVYPALVEDNGTVREGRFSTQAEAEFQHRRALQRLLLQQLAEP 1081
            F++V + AQ K+AGLSMTVYPALVE+ G V+EGRF TQAEAE+QHRRALQRLLLQQLAEP
Sbjct: 1081 FAQVAEKAQAKMAGLSMTVYPALVEEAGVVKEGRFPTQAEAEWQHRRALQRLLLQQLAEP 1140

Query: 1082 AKFLRGKLPGLTELGLLYREMGRVEALVEDILLASLDSCILEGEQPLPREGAALAALAER 1141
            AK+LR KLPGLTELGLLYR+MG+V+ALVEDILLASLDSCIL+GE  LPR+GAALA+LAER
Sbjct: 1141 AKYLRNKLPGLTELGLLYRDMGKVDALVEDILLASLDSCILDGEAQLPRDGAALASLAER 1200

Query: 1142 KRGSWAEHAERLARQTLEVLKLWHGLQKRFKGKIDLSQAVALNDIKQQLGNLVYPGFVRE 1201
            KRG W  HAERLAR TLE+LK WHGLQKRFKGKIDL+QAVALNDIK QLGNLVYPGFVRE
Sbjct: 1201 KRGDWTAHAERLARLTLEILKHWHGLQKRFKGKIDLAQAVALNDIKAQLGNLVYPGFVRE 1260

Query: 1202 TPGVWFKELPRYLKAVELRLEKLGSQVQKDRVWSGELANLWAQYKARADKHAQEGKRDEQ 1261
            TP  W KE PRYLKA+E R EK+G+Q+Q+DRVWSGELA  W QY+ R +KH QEGKRD +
Sbjct: 1261 TPAEWLKEYPRYLKAIEQRFEKIGAQLQRDRVWSGELAGYWEQYQTRLNKHLQEGKRDAE 1320

Query: 1262 LTVYRWWLEEYRVSLFAQQLGTKVPISDKRLSKQWSQVE 1300
            L +YRW LEEYRVSL+AQQLGT++ +SDKRL+KQWSQVE
Sbjct: 1321 LALYRWMLEEYRVSLWAQQLGTRMAVSDKRLNKQWSQVE 1359