Pairwise Alignments

Query, 1301 a.a., ATP-dependent helicase HrpA from Pseudomonas putida KT2440

Subject, 820 a.a., ATP-dependent helicase HrpB from Vibrio cholerae E7946 ATCC 55056

 Score =  266 bits (681), Expect = 4e-75
 Identities = 171/474 (36%), Positives = 253/474 (53%), Gaps = 32/474 (6%)

Query: 70  LPIAAKRDEIKKALAENQVLVIAGETGSGKTTQLPKICLELGRGSHGLIAHTQPRRIAAR 129
           LPI     ++   +  +  L++    G+GK+T  P   L+ G G HG I   +PRR+AAR
Sbjct: 4   LPIIEVMPKLLSGITNSPQLILKAAPGAGKSTYFPLQLLQAG-GFHGKIIMLEPRRLAAR 62

Query: 130 SVAARVAEELGTPLGALVGYQVRFEDQSDSNTLVKLMTDGILLAETQHDRFLERYDTIIV 189
           ++A  +A++LG  +G  VGY+VR E++    T ++++T+GI+    Q+D  L+  D +I 
Sbjct: 63  NIARYLAQQLGEEVGQRVGYRVRGENRVSRATQLEIVTEGIMTRMLQNDPELDGVDVLIF 122

Query: 190 DEAHERSLNIDFLLGY-LKTLLHRRPDLKLIITSATIDLERFSRHFDGAPIIEVSGRTFP 248
           DE HERS++ D  L   L+     R DLK+++ SAT+D +        A  +E  GR FP
Sbjct: 123 DEFHERSIHADTALALALEVQSALREDLKIVVMSATLDQQALQNLLPQASYVESQGRGFP 182

Query: 249 VDTWYRPLTSEQDEEGNQIEDDLTVDQAILATLDELAQHERSEGKGPGDVLIFLPGEREI 308
           ++  Y+PL S++            +  A+   +  L QHE       G +L FLPG   I
Sbjct: 183 IEIRYQPLRSDEP-----------LVTAMQRQIRHLLQHET------GSLLAFLPGAASI 225

Query: 309 RDAAEILRKAQLRHTEILPLYARLSPAEQQRIFQPHTG--RRVVLATNVAETSLTVPGIR 366
               E L        EI PLY ++  A QQR   P     R+VVLATN+AETSLT+ GIR
Sbjct: 226 NQLTEQLSDLA-SEVEICPLYGQMEFAAQQRAIAPTAAGRRKVVLATNIAETSLTIEGIR 284

Query: 367 YVIDTGTARISRYSYRAKVQRLPIEAVSQASANQRKGRCGRVEPGICVRLYSEEDFNSRP 426
            V+D+G  R +R+  +  + RL    ++Q+SA QR GR GR+EPGICVRLYSE     +P
Sbjct: 285 IVLDSGLERSARFDLKTGITRLEQVRIAQSSAEQRAGRAGRLEPGICVRLYSEAQLKQQP 344

Query: 427 AFTDPEILRTNLAAVILQMLHLRLGAIDAFPFIEPPDGKAISDGFNLLQELSAVNRENQL 486
              +PE+L T+LA + L++        D   ++  P   A +    LLQ L  ++   Q+
Sbjct: 345 WVPEPEMLHTDLAPLALELAQWGAQPSD-LAWLNLPPSSAFAQAQQLLQRLGLLDARTQI 403

Query: 487 TPIGRQLARLPIDPRLGRMLLEGARLG--SLQEVLIVTSALSVQDPRERPPERQ 538
           T  G++   L ++PR+  MLL   RLG  +LQ  L +T  L         PERQ
Sbjct: 404 TAAGKEAHLLGVEPRIAAMLLSADRLGESALQSALALTVLL-------EEPERQ 450