Pairwise Alignments

Query, 1301 a.a., ATP-dependent helicase HrpA from Pseudomonas putida KT2440

Subject, 820 a.a., ATP-dependent helicase from Sinorhizobium meliloti 1021

 Score =  259 bits (663), Expect = 5e-73
 Identities = 162/462 (35%), Positives = 246/462 (53%), Gaps = 20/462 (4%)

Query: 70  LPIAAKRDEIKKALAENQVLVIAGETGSGKTTQLPKICLELGRGSHGLIAHTQPRRIAAR 129
           LPI      +  ALA    +V++   G+GKTT +P   L+      G I   +PRR+AAR
Sbjct: 7   LPIREILPGLGDALASAGSVVLSAPPGAGKTTLVPLFLLDQPWRGDGKIILLEPRRLAAR 66

Query: 130 SVAARVAEELGTPLGALVGYQVRFEDQSDSNTLVKLMTDGILLAETQHDRFLERYDTIIV 189
           + A R+AE LG  +G  VGY++R +++    T ++++T+G+       D  L     ++ 
Sbjct: 67  AAAGRMAELLGEKVGETVGYRMRLDNRVSGKTRIEVVTEGVFSRMILDDPELSGVSAVLF 126

Query: 190 DEAHERSLNIDFLLGY-LKTLLHRRPDLKLIITSATIDLERFSRHFDGAPIIEVSGRTFP 248
           DE HERSL+ DF L   L      R DL++++ SAT+D+ER +     AP+++  GR+FP
Sbjct: 127 DEFHERSLDADFGLALALDVQSALREDLRIVVMSATLDVERIAGLVGDAPVLKSEGRSFP 186

Query: 249 VDTWYRPLTSEQDEEGNQIEDDLTVDQAILATLDELAQHERSEGKGPGDVLIFLPGEREI 308
           +D  Y     E    G  +ED         A +  +A+  RSE    G +L FLPG+ EI
Sbjct: 187 IDIRY-----ENRAAGESVED---------AMVRTIAEAHRSE---KGSILAFLPGQAEI 229

Query: 309 RDAAEILRKAQLRHTEILPLYARLSPAEQQRIFQPHTG--RRVVLATNVAETSLTVPGIR 366
              A  L       T I+PLY  LS  EQ    +P     R++VLAT++AETS+T+ G+R
Sbjct: 230 ARTAARLADRFGEATAIVPLYGNLSQKEQDAAIRPAPKGTRKIVLATSIAETSITIDGVR 289

Query: 367 YVIDTGTARISRYSYRAKVQRLPIEAVSQASANQRKGRCGRVEPGICVRLYSEEDFNSRP 426
            V+D+G  R+  +     + RL    VS+ASA+QR GR GR EPGI +RL+      +  
Sbjct: 290 IVVDSGLQRLPVFEASTGITRLETVRVSRASADQRAGRAGRTEPGIAIRLWHSGQTAALA 349

Query: 427 AFTDPEILRTNLAAVILQMLHLRLGAIDAFPFIEPPDGKAISDGFNLLQELSAVNRENQL 486
           AFT P+IL ++L+ ++L + H  +       F++PP    + +   LL EL A++    L
Sbjct: 350 AFTPPQILASDLSGLLLDLAHWGVADPSTLRFLDPPPETTLREARGLLLELGAIDSRGAL 409

Query: 487 TPIGRQLARLPIDPRLGRMLLEGARLGSLQEVLIVTSALSVQ 528
           TP GR++  L +  RL  M +  A  G  QE  ++   L+ Q
Sbjct: 410 TPRGRRIRDLALPVRLAAMAVAAAEEGRAQEACLLAVMLTEQ 451