Pairwise Alignments

Query, 610 a.a., putative ABC transporter, ATP-binding protein/permease protein from Pseudomonas putida KT2440

Subject, 605 a.a., lipid A export permease/ATP-binding protein MsbA from Pseudomonas stutzeri RCH2

 Score =  234 bits (597), Expect = 8e-66
 Identities = 191/602 (31%), Positives = 307/602 (50%), Gaps = 56/602 (9%)

Query: 29  YLYYLRQVWPSFVALLVVGLVASLIEVA---MFSYLSRIIDLAQGTPNANFFS------E 79
           YL  LR V P +  L  + LV  LI  +   M  Y+ +        P ++FF       E
Sbjct: 13  YLRLLRYVVP-YWGLFTISLVGFLIFASTQPMLGYMLKFFVDGLNNPESSFFGQVPYLQE 71

Query: 80  HSG----ELIWMLVVILLLRPLFFGLHDLLVH---QTINPGMTSLIRWQNHTYVLKQSLN 132
           HS     +L+  + ++++   L  G+   L +     ++ G+   +R      +L     
Sbjct: 72  HSWLAELKLLQAVPLLIVFIALMQGIGSFLGNFFLAKVSLGLVHDLRLALFNNMLTLPNR 131

Query: 133 FFQSDFAGRIAQRIMQTGNSLRDSAVQAVDALWHVLIYAITSLVLFAEA---DWRL---- 185
           +F S  +G +  RI      +  +A  A+     V+   +T + LFA     +W+L    
Sbjct: 132 YFDSHNSGHLISRITYNVTMVTGAATDAIKV---VVREGMTVIFLFATLLWMNWKLTLVM 188

Query: 186 --MLPLLAWIVSYIAALFYFVPRVKERSVVSSDARSKLMGRIVDGYTNIATLKLFAHTDY 243
             +LP++ ++VS  +A   F  + K+  +   D  + +    + GY     ++ F    Y
Sbjct: 189 LAILPVIGFMVS--SASKKFRKQSKKIQLAMGDV-THVASETIQGYR---VVRSFGGEPY 242

Query: 244 EQQYAREAIREQTEKTQLASRVITSMDVVITTLNGLLVVATTGLALWLWSQSLITVGAIA 303
           E+     A  E T K QL  R++ +  V   +L    +V  + +A+ ++   L+   A A
Sbjct: 243 ERNRFLTASSENTAK-QL--RMVKTNAVYTPSLQ---LVIYSAMAVLMFLVLLLRGDASA 296

Query: 304 LATGLVIRIVNMSGWIMWVVNGIFENIGMVQDGLQTIAQPVTVTDP-PNAPALKVSRGAV 362
              G ++  + ++G +   +  + E    +Q G+          D  P      + R AV
Sbjct: 297 ---GDLVAYITLAGLLPKPIRQLSEVSSTIQKGVAGAESIFEQLDEEPEIDQGTLEREAV 353

Query: 363 ----RFVDVDFHY-GKATNVIEGLNLDIRPGEKIGLIGPSGAGKSTLVNLLLRLYDVQGG 417
                  ++DF Y G    V+  ++  I PG+ + L+G SG+GKSTL NL+ R Y  + G
Sbjct: 354 SGHLEVRNLDFVYPGTDKQVLRDISFTIEPGQMVALVGRSGSGKSTLANLIPRFYHHEAG 413

Query: 418 RILIDGQDIAKVSQASLRAQIGMITQDTSLLHRSIRENLLYGR-PGASDAELHEAVRRAR 476
           +IL+DG D+   +  +LR  I ++TQ  +L + ++  N+ YG   GA   ++  A R A 
Sbjct: 414 QILLDGADVESYTLRNLRRHIALVTQQVTLFNDTVANNIAYGDLAGAPLDDIRRAARDAY 473

Query: 477 ADEFIPQLSDAQGRTGFDAHVGERGVKLSGGQRQRIAIARVLLKNAPILIMDEATSALDS 536
           ADEFI Q+ +     G+   VGE GV LSGGQRQR+AIAR LLKN+P+LI+DEATSALD+
Sbjct: 474 ADEFIEQMPE-----GYQTLVGENGVLLSGGQRQRLAIARALLKNSPVLILDEATSALDT 528

Query: 537 EVEAAIQESLETLMQGKTVIAIAHRLSTIARMDRLVVLDKGRIVESGSHSELLEQQGLYA 596
           E E  IQ +L+ +MQG+T + IAHRLSTI + D+++V+++GRIVE G+H+ELL   G YA
Sbjct: 529 ESERHIQGALDHVMQGRTTLVIAHRLSTIEKADQILVMEQGRIVERGTHAELLAVNGAYA 588

Query: 597 RL 598
           RL
Sbjct: 589 RL 590