Pairwise Alignments

Query, 610 a.a., putative ABC transporter, ATP-binding protein/permease protein from Pseudomonas putida KT2440

Subject, 721 a.a., type I secretion system permease/ATPase from Vibrio cholerae E7946 ATCC 55056

 Score =  231 bits (590), Expect = 6e-65
 Identities = 162/484 (33%), Positives = 250/484 (51%), Gaps = 26/484 (5%)

Query: 131 LNFFQSDFAGRIAQRIMQTGNSLRDSAVQAVDALWHVLIYAITSLVLFAEAD---WRLML 187
           L +F+    G+I  R+ +     +      +  L  ++   +   V+F  A    W ++ 
Sbjct: 253 LTYFKQRQTGQIIARVREMAQIRQFLTGSTLMLLLDLIFVTVFLAVMFHYASTLTWLVIG 312

Query: 188 PLLAWIVSYIAALFYFVPRVKERSVVSSDARSKLMGRIVDGYTNIATLKLFAHTDYEQQY 247
            L+ + V ++ A      R K  S   SDA +     + +  T I T+K  A      + 
Sbjct: 313 SLVIYFVLWLIAGPLI--RKKVESEYESDANATTF--LTEAVTGIETIKTTATEHRFLEQ 368

Query: 248 AREAIREQTEKTQLASRVITSMDVVITTLNGLLVVATTGLALWLWSQSLITVGAIALATG 307
            +  + +Q  ++  A +      ++      L+   T  L LW W  S +  G I    G
Sbjct: 369 WQRILSQQLNRSFDAQK----SGLIAGQAIALVQKLTAALLLW-WGVSAVLKGEIT--PG 421

Query: 308 LVIRIVNMSGWIMWVVNGIFENIGMVQDGLQTIAQPVTVTDPPNA------PALKVSRGA 361
            ++    ++G +   V  + +     Q  L  + +   + D P         ++    G 
Sbjct: 422 QLVAFNMLAGHVTQPVLRLAQIWQDFQHTLIALRRVGDILDEPRENSKQGLASVPELDGG 481

Query: 362 VRFVDVDFHYGK-ATNVIEGLNLDIRPGEKIGLIGPSGAGKSTLVNLLLRLYDVQGGRIL 420
           + F ++ F Y + A  V+  L+L I+PG+ IG+ GPSG+GKSTL  LL RLY  Q G++L
Sbjct: 482 IEFSNIRFRYHQDAPEVLANLSLKIKPGQFIGVTGPSGSGKSTLTRLLQRLYVPQHGQVL 541

Query: 421 IDGQDIAKVSQASLRAQIGMITQDTSLLHRSIRENLLYGRPGASDAELHEAVRRARADEF 480
           +DG D+A     SLR  + ++ Q++ L   S+ +N+   +P ASD E+  A + A A  F
Sbjct: 542 VDGMDLAIADPVSLRRNMSVVLQESILFSGSVADNIRLCKPQASDEEIRHAAQLAGALAF 601

Query: 481 IPQLSDAQGRTGFDAHVGERGVKLSGGQRQRIAIARVLLKNAPILIMDEATSALDSEVEA 540
           I  L       GF+  VGE+G  LSGGQRQRIA+AR LL N  IL++DEATSALD   EA
Sbjct: 602 IEGLPH-----GFNQPVGEKGAALSGGQRQRIALARALLVNPRILLLDEATSALDYNSEA 656

Query: 541 AIQESLETLMQGKTVIAIAHRLSTIARMDRLVVLDKGRIVESGSHSELLEQQGLYARLWH 600
           +I  +++ + +G+TVI+IAHRL+TI   D + VLDKG++ ESG+H ELL QQGLYA+LW 
Sbjct: 657 SIMSNMDEICRGRTVISIAHRLNTIRHADNIFVLDKGQVAESGTHEELLAQQGLYAKLWT 716

Query: 601 HQTG 604
            Q G
Sbjct: 717 QQVG 720