Pairwise Alignments

Query, 610 a.a., putative ABC transporter, ATP-binding protein/permease protein from Pseudomonas putida KT2440

Subject, 605 a.a., ABC transporter, transmembrane region (NCBI) from Rhodospirillum rubrum S1H

 Score =  246 bits (627), Expect = 3e-69
 Identities = 175/579 (30%), Positives = 286/579 (49%), Gaps = 33/579 (5%)

Query: 32  YLRQVWPSFVALLVVGLVASLIEVAMFSYLSRIIDLAQGTPNAN-FFSEHSGELIWMLVV 90
           +L Q W   +AL V+ ++A     +  ++L +        P  N  F+ H  +++ ++ +
Sbjct: 30  HLAQQW-GLIALAVLCMLAVAASTSAIAWLMK--------PAVNDVFARHDRDVLMLIAL 80

Query: 91  ILLLRPLFFGLHDLLVHQTINP-GMTSLIRWQNHTYVLKQSLN--FFQSDFAGRIAQRIM 147
              +  +  GL +      +N  G+  + R +   Y   Q ++  FF       +  R  
Sbjct: 81  AFPVAFVLKGLANYGQRTLMNRVGLRVVQRCREALYDHLQGMDIAFFAQQQTAALVSRFT 140

Query: 148 QTGNSLRDSAVQAVDALWHVLIYAITSLVLFAEADWRLMLPLLAWIVSYIAALFYFVPRV 207
                L+++    +  +    +  ++ +V     D  L L  +    + +  +     RV
Sbjct: 141 VDLTLLKNTITSGIMVVGRDAVTMVSLVVSLFLLDIELALIAVTVFPAAVLPIALLGKRV 200

Query: 208 KERSVVSSDARSKLMGRIVDGYTNIATLKLFAHTDYEQQYAREAIREQTEKTQLASRVIT 267
           ++ +        +L   ++  +  I  +K++   ++E+      +         + R+  
Sbjct: 201 RKAARGMQAQSGQLDALLLQVFQAIRVVKVYNAGEHERARVAATVDRIYRHLMRSERIGA 260

Query: 268 SMDVVITTLNGLLVVATTGLALWLWSQSLITVGAIALATGLVIRIVNMSGWIMWVVNGIF 327
           ++ +V+  L+G    A       ++    +T G   L  G     +     +   +  I 
Sbjct: 261 AISMVVEILSGFAFAAVV-----IYGGQRVTAGD--LDPGTFFAFITSLFLLYQPIKRIG 313

Query: 328 ENIGMVQDGLQTIAQPVTVTDPP-------NAPALKVSRGAVRFVDVDFHYGKATN-VIE 379
               + Q+G+  + +   V D P       +APAL V  G + F DV   Y       ++
Sbjct: 314 GVNVVAQEGMAAVERMYGVIDTPPALREGKDAPALVVGGGEIVFDDVRLTYPTQEGPALD 373

Query: 380 GLNLDIRPGEKIGLIGPSGAGKSTLVNLLLRLYDVQGGRILIDGQDIAKVSQASLRAQIG 439
           GL+     G  + L+G SGAGKST + L+ R YD  GGR+LIDGQD+  V+  SL A I 
Sbjct: 374 GLSFRAPAGATVALVGRSGAGKSTALQLVPRFYDADGGRVLIDGQDVRAVTFRSLWAAIA 433

Query: 440 MITQDTSLLHRSIRENLLYGRPGASDAELHEAVRRARADEFIPQLSDAQGRTGFDAHVGE 499
           M+TQ+  L   S+R N+ YGRPGAS AE+ +A R A A +FI  L +     G+D  +GE
Sbjct: 434 MVTQEIILFDDSVRANIAYGRPGASQAEIEDAARHAAAHDFILALPE-----GYDTVIGE 488

Query: 500 RGVKLSGGQRQRIAIARVLLKNAPILIMDEATSALDSEVEAAIQESLETLMQGKTVIAIA 559
           +G +LSGGQRQR+ IAR +LKNAPIL++DEATSALD+E E  ++++ E L QG+T I +A
Sbjct: 489 QGTRLSGGQRQRLVIARAMLKNAPILLLDEATSALDTESERHVRQAFERLRQGRTCIVVA 548

Query: 560 HRLSTIARMDRLVVLDKGRIVESGSHSELLEQQGLYARL 598
           HRLST+   D + V+D GRIVESGSH+ LL + GLYA L
Sbjct: 549 HRLSTVMNADIIHVIDAGRIVESGSHAALLAEGGLYADL 587