Pairwise Alignments

Query, 610 a.a., putative ABC transporter, ATP-binding protein/permease protein from Pseudomonas putida KT2440

Subject, 617 a.a., ABC transporter, transmembrane region (NCBI) from Rhodospirillum rubrum S1H

 Score =  283 bits (723), Expect = 2e-80
 Identities = 204/617 (33%), Positives = 316/617 (51%), Gaps = 50/617 (8%)

Query: 14  REAPSEAPPSTV-----WPFYLYYLRQVWPSFVALLVVGLVASLIEVAMFSYLSRIIDLA 68
           R A +  PP+T      W      L  +WP+    L + LV S+  + +      ++ L 
Sbjct: 3   RPASTLPPPTTSGAVRDWRVIARLLPHLWPADAPALRLRLVLSMGVLLLAKLAGVVVPL- 61

Query: 69  QGTPNANFFSEHSGELIWMLVVILLLRPL---------------FFGLHDLLVHQTINPG 113
                   F +H+ + + +     ++ PL               F  + DLL  + I   
Sbjct: 62  --------FYKHAVDALSVPERAAIVLPLGVIAAYGLARLGNLAFTEIRDLLFARVIERA 113

Query: 114 MTSL-IRWQNHTYVLKQSLNFFQSDFAGRIAQRIMQTGNS-----LRDSAVQAVDALWHV 167
           +  L +R   H + L  SL F      G ++ R+++ G       LR   ++A  +L  +
Sbjct: 114 IHVLSLRTFRHLHGL--SLRFHLDRQTGGLS-RVIERGTRAIEVVLRQFVLRAGPSLIEL 170

Query: 168 LIYAITSLVLFAEADWRLMLPLLAWIVSYIAALFYFVPRVKE--RSVVSSDARSKLMGRI 225
           ++      VL+   DW   + ++  +  Y+A          +  RS+ + DA +    + 
Sbjct: 171 VMVCG---VLWTLYDWTYAVVMVGALAVYVAWTLAITEWRLDFRRSMNTHDAEAS--SKA 225

Query: 226 VDGYTNIATLKLFAHTDYEQQYAREAIREQTEKTQLASRVITSMDVVITTLNGLLVVATT 285
           +D   N  T+K F + ++E +    A+    E    + R ++ ++V  + +  L +VA  
Sbjct: 226 IDSLINYETVKYFGNEEHEAKRFDRALSAYEEVAVKSHRSLSLLNVGQSAIISLSLVAVM 285

Query: 286 GLALWLWSQSLITVGAIALATGLVIRIVNMSGWIMWVVNGIFENIGMVQDGLQTIAQPVT 345
            +A        +T G   L    ++++     ++  V   + + +  ++     I +P  
Sbjct: 286 IMAAVDIRGGRMTPGDFVLVNTYLLQLYVPLNFLGMVYREVKQGLVDMEVLFGLIDRPPE 345

Query: 346 VTDPPNAPALKVSRGAVRFVDVDFHYGKATNVIEGLNLDIRPGEKIGLIGPSGAGKSTLV 405
           V DP NA  L V  GAVRF  V F Y     V++G++L+I  G  + ++G SGAGKSTL 
Sbjct: 346 VADPANAADLVVRGGAVRFEGVRFAYNPEREVLKGVSLEIPAGGTLAVVGHSGAGKSTLS 405

Query: 406 NLLLRLYDVQGGRILIDGQDIAKVSQASLRAQIGMITQDTSLLHRSIRENLLYGRPGASD 465
            LL R YDV GGR+LIDGQD+  V+QASLR  IG++ QDT L + +I  N+ YGRPGAS 
Sbjct: 406 RLLFRFYDVTGGRVLIDGQDLRDVTQASLRRAIGIVPQDTVLFNDTIGYNIAYGRPGASR 465

Query: 466 AELHEAVRRARADEFIPQLSDAQGRTGFDAHVGERGVKLSGGQRQRIAIARVLLKNAPIL 525
            E+  A R A   +F+  L     + G+D  VGERG+KLSGG++QR+AIAR +LK+  IL
Sbjct: 466 QEVERAARLAAIHDFVQSL-----KNGYDTQVGERGLKLSGGEKQRVAIARTILKDPAIL 520

Query: 526 IMDEATSALDSEVEAAIQESLETLMQGKTVIAIAHRLSTIARMDRLVVLDKGRIVESGSH 585
           I+DEATSALDS  E  IQ +L  + +G+T + IAHRLST+   DR++VLD GR+ ESGSH
Sbjct: 521 ILDEATSALDSHTEREIQGALRDVSRGRTTLVIAHRLSTVIDADRILVLDGGRVAESGSH 580

Query: 586 SELLEQQGLYARLWHHQ 602
            +LL  +GLYA LW  Q
Sbjct: 581 DDLLRAEGLYAALWRKQ 597