Pairwise Alignments

Query, 433 a.a., mechanosensitive channel of miniconductance from Pseudomonas putida KT2440

Subject, 569 a.a., mechanosensitive ion channel protein MscS from Vibrio cholerae E7946 ATCC 55056

 Score = 46.2 bits (108), Expect = 3e-09
 Identities = 26/112 (23%), Positives = 55/112 (49%), Gaps = 3/112 (2%)

Query: 143 YVQLAKMMLWIFASIIIVATLIDRSPLLLLSGLGAMSAVLLLVYKDTLLSFVASVQLTSN 202
           +V ++  ++W+   I++  + I  +   +L+G G    ++    +DTL +F A + L   
Sbjct: 345 FVSMSGKVVWVIG-ILVGLSQIGLNLAPVLTGFGIAGVIIGFALQDTLSNFAAGMMLLIY 403

Query: 203 DMLHVGDWIEMPQVGADGDVVDITLHTVKVQNFDKTIVSIPTWRLMSESFRN 254
               VGD++     G DG V  ++L    ++ FD  I+ +P  ++  +  +N
Sbjct: 404 RPFDVGDFVHAG--GVDGKVSHMSLVNTTIRTFDNQIIIVPNSKIWGDVIKN 453