Pairwise Alignments

Query, 433 a.a., mechanosensitive channel of miniconductance from Pseudomonas putida KT2440

Subject, 274 a.a., MscS mechanosensitive ion channel (RefSeq) from Shewanella loihica PV-4

 Score = 45.1 bits (105), Expect = 3e-09
 Identities = 44/187 (23%), Positives = 77/187 (41%), Gaps = 26/187 (13%)

Query: 77  QTTPSLVLQFGLKLV-PELSDTAQHFLGNVALAFTLLFMTMALSCLLDALLDIYARTEHA 135
           +  P L+L +GL++V   +      +L NVA   T   M                     
Sbjct: 9   EQAPELILTYGLQVVFAIIIFIIGKYLANVAKKLTTKLMN-------------------- 48

Query: 136 RTRSIKGYVQLAKMMLWIFASII-IVATL--IDRSPLLLLSGLGAMSAVLLLVYKDTLLS 192
           + +  K  V     M W    +  ++ATL  I      L++ +GA    + L  + +L +
Sbjct: 49  KRKIDKTVVSFVANMAWALVFVFTVIATLGQIGVQTASLVAVIGAAGLAVGLALQGSLSN 108

Query: 193 FVASVQLTSNDMLHVGDWIEMPQVGADGDVVDITLHTVKVQNFDKTIVSIPTWRLMSESF 252
           F + V +       VGD+IE    G  G V +IT+ + K++  D  ++  P   +M+ + 
Sbjct: 109 FASGVLMVLFRPCRVGDYIEA--AGIAGTVDEITIFSTKLRTPDNKVIVAPNSSIMNGTI 166

Query: 253 RNYRGMQ 259
            NY  M+
Sbjct: 167 TNYSAME 173