Pairwise Alignments

Query, 440 a.a., ATP-dependent DEAD-box RNA helicase require for 50S ribosomal subunit biogenesis from Pseudomonas putida KT2440

Subject, 499 a.a., ATP-dependent RNA helicase from Sinorhizobium meliloti 1021

 Score =  256 bits (655), Expect = 9e-73
 Identities = 159/422 (37%), Positives = 232/422 (54%), Gaps = 21/422 (4%)

Query: 2   FSQFALHERLLKAVAELKFVEPTPVQAAAIPLALQGRDLRVTAQTGSGKTAAFVLPLLNR 61
           F+   L +++L AV +  +  PTP+Q  AIP ALQ RD+   AQTG+GKTA+FVLP+L  
Sbjct: 4   FADLGLSQKVLSAVTDAGYTIPTPIQVGAIPPALQRRDILGIAQTGTGKTASFVLPMLT- 62

Query: 62  LVDLSGPRVEI-RALILLPTRELAQQTLKQVQLFSQFTYIKSGLVTGGEDFKEQAAMLRK 120
           L++    R  + R LIL PTRELA Q  +    + +   +   L+ GG  F EQ   L +
Sbjct: 63  LLEKGRARARMPRTLILEPTRELAAQVAENFDKYGKNHKLNIALLIGGVSFDEQDRKLER 122

Query: 121 VPDVLIGTPGRLLEQLNAGNLDLSHVQVLILDEADRMLDMGFAEDMERLCKECENREQTL 180
             DVLI TPGRLL+    G L ++ V++L++DEADRMLDMGF  D+ER+ K      QTL
Sbjct: 123 GADVLICTPGRLLDHCERGKLLMTGVEILVIDEADRMLDMGFIPDIERIAKLIPFTRQTL 182

Query: 181 LFSATTGGAALRDIIGKVLKDPEHLMLNSVSQLAEGTRQQIITADHDQHKEQ--IAQWLL 238
            FSAT     ++ +  + L++PE L +   S  A    Q+ + A    ++++  + + + 
Sbjct: 183 FFSATMP-PEIQKLADRFLQNPERLEVARRSSTAITVTQRFVAAHGKDYEKRAVLRELIR 241

Query: 239 ANETFDKAIIFTNTRAMADRIYGHLVAKDVKAFVLHGEKDQKDRKLAIERFKQGSSKVLV 298
           + E    AIIF N +     ++  L         LHG+ DQ+ R   +  FK G+ K+LV
Sbjct: 242 SQEDLKNAIIFCNRKKDVAELFRSLDRHGFSVGALHGDMDQRSRMAMLANFKDGNIKLLV 301

Query: 299 ATDVAARGLDIDGLDLVINFDMPRSGDEYVHRVGRTGRAGGEGLAISLITHNDWNLMSSI 358
           A+DVAARGLDI  +  V NFD+P   ++YVHR+GRTGRAG  G A +++T  +     +I
Sbjct: 302 ASDVAARGLDIPDVSHVFNFDVPIHAEDYVHRIGRTGRAGRSGAAFTIVTKRETKFSDAI 361

Query: 359 ERYLKQQFERRVIKEVKGTYNG-------PKKVKASGKAAGSKKKKVEKKTGDKKAAAKR 411
           E+ + Q+ E          +NG       P +   S +  GS  +K  K+    K  A R
Sbjct: 362 EKLIGQKVE---------WFNGDLSELPEPMESHDSRRDRGSDGRKDRKRERPGKVHADR 412

Query: 412 KP 413
           KP
Sbjct: 413 KP 414