Pairwise Alignments

Query, 440 a.a., ATP-dependent DEAD-box RNA helicase require for 50S ribosomal subunit biogenesis from Pseudomonas putida KT2440

Subject, 474 a.a., DNA/RNA helicase, superfamily II from Dechlorosoma suillum PS

 Score =  283 bits (723), Expect = 1e-80
 Identities = 175/465 (37%), Positives = 264/465 (56%), Gaps = 34/465 (7%)

Query: 2   FSQFALHERLLKAVAELKFVEPTPVQAAAIPLALQGRDLRVTAQTGSGKTAAFVLPLLNR 61
           F +  L   +LKAV E+ + E TP+Q  AIPL LQG+DL+  AQTG+GKTAAF LPL+ R
Sbjct: 3   FDELGLAPEILKAVTEMGYAEATPIQQQAIPLVLQGKDLKACAQTGTGKTAAFTLPLIQR 62

Query: 62  LVDL-----SGPRVEIRALILLPTRELAQQTLKQVQLFSQFTYIKSGLVTGGEDFKEQAA 116
           L+ L     S  +  +RAL+L PTRELA Q  + V+ ++++T+ +S  + GG D K Q A
Sbjct: 63  LLHLDTASPSPAKHPVRALMLAPTRELALQVYESVKSYTKYTHFRSICLFGGVDIKPQIA 122

Query: 117 MLRKVPDVLIGTPGRLLEQLNAGNLDLSHVQVLILDEADRMLDMGFAEDMERLCKECENR 176
            ++K  + ++ TPGRLL+ +   ++  + VQ L+LDEADRMLDMGF  D++R+       
Sbjct: 123 EMKKGVEFVVATPGRLLDHVEQKSVSFNQVQALVLDEADRMLDMGFIPDIQRILNMLPKT 182

Query: 177 EQTLLFSATTGGAALRDIIGKVLKDPEHLMLNSVSQLAEGTRQQIITADHDQHKEQIAQW 236
            Q+LLFSAT      R +   +L+ P  + +   +Q+ +    ++      + K+ + + 
Sbjct: 183 RQSLLFSATFSNEIQR-LADTMLQSPILVEVARRNQVNDTITHRVHPVAETRKKDLLIKL 241

Query: 237 LLANETFDKAIIFTNTRAMADRIYGHLVAKDVKAFVLHGEKDQKDRKLAIERFKQGSSKV 296
           L + E   + ++F  T+    R+   L    + A  +HG+K Q +R  A++ FK G  KV
Sbjct: 242 LRSGE-ITQTLVFMRTKQGCGRLARELERAGIAADSIHGDKSQNERIKALDAFKNGGCKV 300

Query: 297 LVATDVAARGLDIDGLDLVINFDMPRSGDEYVHRVGRTGRAGGEGLAISLITHNDWNLMS 356
           LVATDVAARGLDID L  VINF++P + ++YVHR+GRTGRAG +G AISL+  ++   ++
Sbjct: 301 LVATDVAARGLDIDHLPYVINFELPHTPEDYVHRIGRTGRAGRQGNAISLVCAHEVGYLA 360

Query: 357 SIERYLKQQFERRVIK--EVKGTYNGP----KKVKA------SGKAAGSKKKKVEK---- 400
            IE+ +K Q E+  +   E +  Y  P    KK +A      S   AG  K  V++    
Sbjct: 361 DIEKLIKMQIEQVAVAGFEPEMDYEYPPGSGKKRRAHETHAPSQPVAGRSKPPVKRNNMI 420

Query: 401 --------KTGDKKAAAKRKPTAKPKANAPLASADGLAPLKKRKP 437
                   K  + KAA    P+ +  A+ P+   D   P K +KP
Sbjct: 421 AKDGFDFSKPYEPKAAPATVPSKEEAAHTPVGKPD---PHKPKKP 462